RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 ITPR3Q14573 2671 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 TRAPPC2P0DI81 140 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 TRAPPC2BP0DI82 140 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 LPAR6P43657 344 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 HLA-DRB5Q30154 266 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 GGNBP1Q5YKI7 109 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 SSX9Q7RTT3 188 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 LHFPL4Q7Z7J7 247 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 FOXRED2Q8IWF2 684 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 HSD17B10Q99714 261 aaKnown RBP12.73□□□□□ -0.37
SHANK2-204ENST00000409530 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 A0A087X0M5 115 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 A0A1B0GX30 115 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 SCGB1D2O95969 90 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 RBP4P02753 201 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 EIF4EBP1Q13541 118 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-204ENST00000409530 VKORC1L1Q8N0U8 176 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 ZBTB34Q8NCN2 500 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 OR4P4Q8NGL7 312 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 OR2T35Q8NGX2 323 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 KPTNQ9Y664 436 aa12.73□□□□□ -0.37
SHANK2-204ENST00000409530 A0A096LNT2 108 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 DBX1A6NMT0 343 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 H7C2Y5 167 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 CRYZL1O95825 349 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 KRASP01116 189 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 IGKV1-39P01597 117 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 IGKV1D-39P04432 117 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 PRTN3P24158 256 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 UCP1P25874 307 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 G6PCP35575 357 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 PRRX1P54821 245 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 BRWD1-AS2P59051 145 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 GSG1LQ6UXU4 331 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 SELENOHQ8IZQ5 122 aaKnown RBP12.72□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF383Q8NA42 475 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
SHANK2-204ENST00000409530 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 ITGB1BP1O14713 200 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 Q5BKY6 102 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 HCP5Q6MZN7 132 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF66Q6ZN08 573 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 TGIF2LXQ8IUE1 241 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 KIR3DL3Q8N743 410 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
SHANK2-204ENST00000409530 RBPMSQ93062 196 aaKnown RBP12.71□□□□□ -0.37
SHANK2-204ENST00000409530 A0A0G2JRQ6 117 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 IFNA21P01568 189 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 IGLV1-47P01700 117 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 CT45A6P0DMU7 189 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 CT45A5P0DMU8 189 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 CT45A7P0DMV0 189 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 MMP9P14780 707 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 IL3RAP26951 378 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 IAH1Q2TAA2 248 aaPredicted RBP12.71□□□□□ -0.38
SHANK2-204ENST00000409530 LDLRAD2Q5SZI1 272 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 ZNF596Q8TC21 504 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 TNFRSF14Q92956 283 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 RPEQ96AT9 228 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 C18orf12Q96KH6 178 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.38
SHANK2-204ENST00000409530 B4DSR2 109 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 TGFAP01135 160 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 S100A10P60903 97 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 CIARTQ8N365 385 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-204ENST00000409530 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 PRELID3BQ9Y3B1 194 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.388e-8■■■□□ 15.2
SHANK2-204ENST00000409530 CDS2O95674 445 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 THBS3P49746 956 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 SRPXP78539 464 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 BRD3OSQ6XYD6 125 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-204ENST00000409530 GRPEL2Q8TAA5 225 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-204ENST00000409530 C7orf69Q9H7B7 122 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
SHANK2-204ENST00000409530 FLNAP21333 2647 aaKnown RBP12.69□□□□□ -0.38
SHANK2-204ENST00000409530 CREBBPQ92793 2442 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 CD24P25063 80 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 LGALS4P56470 323 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 SSX2Q16385 188 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 LINC00311Q8N616 119 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms