RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 IGF1P05019 195 aa14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 THBS3P49746 956 aa14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 TAGLNQ01995 201 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 CBX3Q13185 183 aa14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 PSG5Q15238 335 aa14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 CMTM3Q96MX0 182 aa14.11□□□□□ -0.15
PDLIM2-206ENST00000409141 NOTCH1P46531 2555 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 IGHV7-81A0A0B4J1V7 117 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 APOA1P02647 267 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 PF4V1P10720 104 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 MZT2AQ6P582 158 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 ZNF645Q8N7E2 425 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 ADTRPQ96IZ2 230 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 CLCC1Q96S66 551 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 IFT46Q9NQC8 304 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 PARP11Q9NR21 331 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 NECAP2Q9NVZ3 263 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 METTL1Q9UBP6 276 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 MRPS7Q9Y2R9 242 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 WSB1Q9Y6I7 421 aa14.1□□□□□ -0.15
PDLIM2-206ENST00000409141 FCN1O00602 326 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 SLC22A5O76082 557 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 OR5H8P0DN80 308 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 ZNF182P17025 639 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 DUTP33316 252 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 PRSS3P35030 304 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 CX3CL1P78423 397 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 RTL8BQ17RB0 113 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 CLVS1Q8IUQ0 354 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 BVESQ8NE79 360 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 AP3S1Q92572 193 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 ZFP57Q9NU63 452 aa14.09□□□□□ -0.15
PDLIM2-206ENST00000409141 IGKV1D-13A0A0B4J2D9 117 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 ATP6V0E1O15342 81 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 HPGDSO60760 199 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 TUSC2O75896 110 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 SPDEFO95238 335 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 IGKV1-13P0DP09 117 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 RRASP10301 218 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 ELK1P19419 428 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 FCGR2CP31995 323 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 LGALS7P47929 136 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 RPL23AP62750 156 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 FOXE3Q13461 319 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 CXorf66Q5JRM2 361 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 ZNF660Q6AZW8 331 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 OR5AP2Q8NGF4 316 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 SNAPC3Q92966 411 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 ZNF580Q9UK33 172 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 CMYA5Q8N3K9 4069 aa14.08□□□□□ -0.16
PDLIM2-206ENST00000409141 LINC00473A8K010 186 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 FAM25AB3EWG3 89 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 FAM25CB3EWG5 89 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 FAM25GB3EWG6 89 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 G3V318 75 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 SLC25A17O43808 307 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 IGHG4P01861 327 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 PF4P02776 101 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 ELANEP08246 267 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 RPL5P46777 297 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 CFHR3Q02985 330 aa14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 RBMX2Q9Y388 322 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-206ENST00000409141 MEGF8Q7Z7M0 2845 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 TRAV41A0A0B4J266 112 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 NUDT19A8MXV4 375 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 SHOXO15266 292 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 RPLP1P05386 114 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 AADACP22760 399 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 CDK10Q15131 360 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 TMEM177Q53S58 311 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 ABHD5Q8WTS1 349 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 DDB2Q92466 427 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 HARBI1Q96MB7 349 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 IGLV2-14P01704 120 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 SPCS2Q15005 226 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 ZNF562Q6V9R5 426 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 C18orf65Q6ZTR6 163 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 SNX29P2Q8IUI4 249 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 SECTM1Q8WVN6 248 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 PRELID3BQ9Y3B1 194 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 A3GALT2U3KPV4 340 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 NOTCH3Q9UM47 2321 aa14.06□□□□□ -0.16
PDLIM2-206ENST00000409141 CRYZL1O95825 349 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 CA2P00918 260 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 PPYP01298 95 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 IGLV2-23P01705 113 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 PPIFP30405 207 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 TMBIM6P55061 237 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 NDPQ00604 133 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 ECSCRQ19T08 205 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 TMEM65Q6PI78 240 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 KCTD9Q7L273 389 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 PPP1R27Q86WC6 154 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 C1QL4Q86Z23 238 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 ZNF695Q8IW36 515 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 KLHL30-AS1Q8NEE0 82 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 RAB2BQ8WUD1 216 aa14.05□□□□□ -0.16
PDLIM2-206ENST00000409141 GIMAP1Q8WWP7 306 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms