RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TAF15Q92804 592 aaKnown RBP eCLIP7.05□□□□□ -1.28
SNX13-201ENST00000409076 HIST1H2BLQ99880 126 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 LRFN3Q9BTN0 628 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TLN1Q9Y490 2541 aaKnown RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 IER3P46695 156 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ZNF83P51522 516 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 C17orf82Q86X59 251 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 RPP25LQ8N5L8 163 aaKnown RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 KIR3DL3Q8N743 410 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 SGMS2Q8NHU3 365 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 GTF3AQ92664 365 aaKnown RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 C14orf144Q96I85 54 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 TTTY12Q9BZ98 90 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 TP53TG5Q9Y2B4 290 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ZNF729A6NN14 1252 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 TNFSF15O95150 251 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 GZMHP20718 246 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 KITLGP21583 273 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 GPR12P47775 334 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 PAX9P55771 341 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 HTD2P86397 168 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ABLIM2Q6H8Q1 611 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ZNRF1Q8ND25 227 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 OR2M7Q8NG81 312 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 IMMP1LQ96LU5 166 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ODAMA1E959 279 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 EREGO14944 169 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 TCAPO15273 167 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 PSPNO60542 156 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 CA1P00915 261 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 IGKV1-39P01597 117 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 IGKV1D-39P04432 117 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 MPV17P39210 176 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 CEACAM21Q3KPI0 293 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 C10orf91Q5T1B1 145 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 GALMQ96C23 342 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 SSBP3Q9BWW4 388 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 SEBOXQ9HB31 216 aaPredicted RBP7.04□□□□□ -1.28
SNX13-201ENST00000409076 ENY2Q9NPA8 101 aa7.04□□□□□ -1.28
SNX13-201ENST00000409076 KIAA1549Q9HCM3 1950 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 F6UZH7 168 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 SH2D1BO14796 132 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 PTBP3O95758 552 aaKnown RBP7.03□□□□□ -1.28
SNX13-201ENST00000409076 HBZP02008 142 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 MPZP25189 248 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 UCP3P55916 312 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 PPP1CBP62140 327 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 OR2T10Q8NGZ9 312 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 TBX15Q96SF7 602 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 ASCL2Q99929 193 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 RTL8AQ9BWD3 113 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 QTRT1Q9BXR0 403 aaKnown RBP7.03□□□□□ -1.28
SNX13-201ENST00000409076 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 IGF2RP11717 2491 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 HAND1O96004 215 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 IFI6P09912 130 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 GCH1P30793 250 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 SOX8P57073 446 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 SLC10A1Q14973 349 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 HIST3H3Q16695 136 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 TBC1D28Q2M2D7 210 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 MOB3BQ86TA1 216 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 HAPLN4Q86UW8 402 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 LIN7CQ9NUP9 197 aaKnown RBP7.03□□□□□ -1.28
SNX13-201ENST00000409076 DOPEY2Q9Y3R5 2298 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 TRAV3A0A0B4J244 114 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 CYB5R3P00387 301 aaPredicted RBP7.03□□□□□ -1.28
SNX13-201ENST00000409076 IGHV2-5P01817 119 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 FRMD6-AS1P0C7T7 363 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 CD46P15529 392 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 ZNF124Q15973 351 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 SPATA31B1PQ5VZV4 182 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 LYG1Q8N1E2 194 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 OR4P4Q8NGL7 312 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
SNX13-201ENST00000409076 PARD6AQ9NPB6 346 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 DMRT1Q9Y5R6 373 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 NCKAP5O14513 1909 aa7.03□□□□□ -1.28
SNX13-201ENST00000409076 LY6G6EA0A0G2JKS1 128 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 AMBPP02760 352 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 LYL1P12980 280 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 CAMPP49913 170 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 DLX1P56177 255 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.29
SNX13-201ENST00000409076 OR8B8Q15620 311 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 MSMO1Q15800 293 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 DOLPP1Q86YN1 238 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 OR1P1Q8NH06 330 aa7.02□□□□□ -1.29
SNX13-201ENST00000409076 LRRC29Q8WV35 223 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms