RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 GNB4Q9HAV0 340 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 TMEM56-RWDD3S4R434 201 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 MYO16Q9Y6X6 1858 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 A0A087WV48 116 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 FAM216AQ8WUB2 273 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 LYZP61626 148 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF664Q8N3J9 261 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 KCNS1Q96KK3 526 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 DNAJC13O75165 2243 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 hADV38S2A0JD32 116 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 GCHFRP30047 84 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 IL11RAQ14626 422 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF324BQ6AW86 544 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-202ENST00000409031 ABHD3Q8WU67 409 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF488Q96MN9 340 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 CDX2Q99626 313 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-202ENST00000409031 TWSG1Q9GZX9 223 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 WFDC1Q9HC57 220 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 A6NNC1 897 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SMIM17P0DL12 118 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 KCNMB1Q16558 191 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF525Q8N782 197 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 OR10AG1Q8NH19 301 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 TMEM208Q9BTX3 173 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-202ENST00000409031 OR4C46A6NHA9 309 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 CA7P43166 264 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 TFPI2P48307 235 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 PAQR4Q8N4S7 273 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-202ENST00000409031 OR1L8Q8NGR8 309 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SFXN3Q9BWM7 321 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 POU2F2P09086 479 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 MYF5P13349 255 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SNAI3Q3KNW1 292 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SLC35E4Q6ICL7 350 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 LRTM2Q8N967 370 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 MYOZ3Q8TDC0 251 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 MBD3L1Q8WWY6 194 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 C19orf24Q9BVV8 132 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SMOC1Q9H4F8 434 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 CABIN1Q9Y6J0 2220 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 CEACAM1P13688 526 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SPINK2P20155 84 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 HERVK_113P61574 105 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 SELENOTP62341 195 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 CCL7P80098 99 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 NPCDR1Q9BY65 106 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 PLA2G2FQ9BZM2 168 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 AICDAQ9GZX7 198 aa15.16■□□□□ 0.02
SMPD4-202ENST00000409031 COL11A1P12107 1806 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-202ENST00000409031 TRAV1-1A0A0B4J248 108 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 TMEM238LA0A1B0GVL6 79 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 A6NJY4 79 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF785A8K8V0 405 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 CENPWQ5EE01 88 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 HSPB7Q9UBY9 170 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 A8MWP6 167 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 HYAL1Q12794 435 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 LHFPL1Q86WI0 220 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 DLL3Q9NYJ7 618 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 C8orf88P0DMB2 117 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 LIFP15018 202 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 SOX8P57073 446 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 ERASQ7Z444 233 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 DOLPP1Q86YN1 238 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-202ENST00000409031 MKRN2OSH3BPM6 223 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 SPRY3O43610 288 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 TNFRSF1AP19438 455 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 CEBPDP49716 269 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-202ENST00000409031 RPL11P62913 178 aaKnown RBP15.15■□□□□ 0.02
SMPD4-202ENST00000409031 LPAL2Q16609 132 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 LDLRAD2Q5SZI1 272 aa15.15■□□□□ 0.02
SMPD4-202ENST00000409031 SHISA7A6NL88 538 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 M0R1B8 84 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 RPL7P18124 248 aaKnown RBP15.14■□□□□ 0.01
SMPD4-202ENST00000409031 FAM89BQ8N5H3 189 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 SLC17A3O00476 420 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 GZMBP10144 247 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 ACP1P24666 158 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 TMEM140Q9NV12 185 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 CACNA1DQ01668 2161 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 KLF7O75840 302 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-202ENST00000409031 CLDN18P56856 261 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 TCTAP57738 103 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 SUPT4H1P63272 117 aaKnown RBP15.14■□□□□ 0.01
SMPD4-202ENST00000409031 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 A1L4Q6 167 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 ID3Q02535 119 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 MMDQ15546 238 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 ST6GALNAC3Q8NDV1 305 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 AMMECR1Q9Y4X0 333 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-202ENST00000409031 OR51B2Q9Y5P1 312 aa15.14■□□□□ 0.01
SMPD4-202ENST00000409031 A0A1W2PRS3 328 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 MOB3BQ86TA1 216 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 K7EQS6 105 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 MST1LQ2TV78 715 aa15.13■□□□□ 0.01
SMPD4-202ENST00000409031 C10orf91Q5T1B1 145 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms