RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 UNQ5815/PRO19632Q6UWF5 114 aa17.39■□□□□ 0.37
KDELR3-202ENST00000409006 ZNF562Q6V9R5 426 aa17.39■□□□□ 0.37
KDELR3-202ENST00000409006 DLX4Q92988 240 aaPredicted RBP17.39■□□□□ 0.37
KDELR3-202ENST00000409006 MS4A10Q96PG2 267 aa17.39■□□□□ 0.37
KDELR3-202ENST00000409006 IGHV4OR15-8A0A075B7B6 117 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 A0A087WW49 117 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 SMIM30A4D0T7 59 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 ARPC1BO15143 372 aaKnown RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 IGHV3-11P01762 117 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 OR8U9P0C7N5 309 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 SSBP2P81877 361 aaPredicted RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 TMEM267Q0VDI3 215 aaPredicted RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 DCTN2Q13561 401 aaKnown RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 AKIRIN2Q53H80 203 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 PDPNQ86YL7 162 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 TCTEX1D1Q8N7M0 179 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 TSNAXQ99598 290 aaKnown RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 CABLES2Q9BTV7 478 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 SDHAF2Q9NX18 166 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 ELF5Q9UKW6 265 aaPredicted RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 BLOC1S6Q9UL45 172 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 RAB26Q9ULW5 256 aa17.38■□□□□ 0.37
KDELR3-202ENST00000409006 ZNF256Q9Y2P7 627 aaPredicted RBP17.38■□□□□ 0.37
KDELR3-202ENST00000409006 TRBV6-7A0A0A0MS04 114 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 OVOL1O14753 267 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 SLC25A17O43808 307 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 IGLV2-23P01705 113 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 LGALS1P09382 135 aaKnown RBP17.37■□□□□ 0.37
KDELR3-202ENST00000409006 RAB3BP20337 219 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 C22orf42Q6IC83 251 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 FLYWCH2Q96CP2 140 aaKnown RBP17.37■□□□□ 0.37
KDELR3-202ENST00000409006 OR2D2Q9H210 308 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 SLC35D1Q9NTN3 355 aa17.37■□□□□ 0.37
KDELR3-202ENST00000409006 IGKV1D-8A0A087WSZ0 117 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 LINC01619G3V211 115 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 SPDEFO95238 335 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 APOA2P02652 100 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 HIST1H1DP16402 221 aaKnown RBP17.36■□□□□ 0.37
KDELR3-202ENST00000409006 RAB6AP20340 208 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 MYL9P24844 172 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 RANBP1P43487 201 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 SERPINB10P48595 397 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 MRPS15P82914 257 aaKnown RBP17.36■□□□□ 0.37
KDELR3-202ENST00000409006 PJVKQ0ZLH3 352 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.36■□□□□ 0.37
KDELR3-202ENST00000409006 OR10J5Q8NHC4 309 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 ARPC1AQ92747 370 aa17.36■□□□□ 0.37
KDELR3-202ENST00000409006 TNCP24821 2201 aa17.35■□□□□ 0.37
KDELR3-202ENST00000409006 CRYGBP07316 175 aa17.35■□□□□ 0.37
KDELR3-202ENST00000409006 TPPP2P59282 170 aa17.35■□□□□ 0.37
KDELR3-202ENST00000409006 FXYD3Q14802 87 aa17.35■□□□□ 0.37
KDELR3-202ENST00000409006 GRPEL2Q8TAA5 225 aa17.35■□□□□ 0.37
KDELR3-202ENST00000409006 GADD45AP24522 165 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 INSL3P51460 131 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 GABARAPL2P60520 117 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 PYHIN1Q6K0P9 492 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 RHOVQ96L33 236 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 ASCL2Q99929 193 aa17.34■□□□□ 0.37
KDELR3-202ENST00000409006 SRRM4A7MD48 611 aaKnown RBP17.33■□□□□ 0.36
KDELR3-202ENST00000409006 LY86O95711 162 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 ARFRP1Q13795 201 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 UBE2UQ5VVX9 321 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 ZNF429Q86V71 674 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 SPARTQ8N0X7 666 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 BVESQ8NE79 360 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 WWC2-AS2Q96NR7 200 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 ATG5Q9H1Y0 275 aa17.33■□□□□ 0.36
KDELR3-202ENST00000409006 SAP30O75446 220 aa17.32■□□□□ 0.36
KDELR3-202ENST00000409006 TRGV3P03979 118 aa17.32■□□□□ 0.36
KDELR3-202ENST00000409006 HSPB1P04792 205 aaKnown RBP17.32■□□□□ 0.36
KDELR3-202ENST00000409006 GALP22466 123 aa17.32■□□□□ 0.36
KDELR3-202ENST00000409006 MRGPRG-AS1Q2M3A8 158 aa17.32■□□□□ 0.36
KDELR3-202ENST00000409006 OR5T1Q8NG75 326 aa17.32■□□□□ 0.36
KDELR3-202ENST00000409006 TXNL4BQ9NX01 149 aaKnown RBP17.32■□□□□ 0.36
KDELR3-202ENST00000409006 KMT2CQ8NEZ4 4911 aaKnown RBP17.32■□□□□ 0.36
KDELR3-202ENST00000409006 METTL21EPA6NDL7 271 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 DIRAS3O95661 229 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 NHLRC4P0CG21 123 aaPredicted RBP17.31■□□□□ 0.36
KDELR3-202ENST00000409006 ACSM6Q6P461 480 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 H1FOOQ8IZA3 346 aaPredicted RBP17.31■□□□□ 0.36
KDELR3-202ENST00000409006 HARBI1Q96MB7 349 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 SLA2Q9H6Q3 261 aa17.31■□□□□ 0.36
KDELR3-202ENST00000409006 MRPS14O60783 128 aaKnown RBP17.3■□□□□ 0.36
KDELR3-202ENST00000409006 CNIH1O95406 144 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 SPNP16150 400 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 PSMB9P28065 219 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 TALDO1P37837 337 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 LGALS7P47929 136 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 SRSF7Q16629 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
KDELR3-202ENST00000409006 TMEM177Q53S58 311 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 Q6ZS49 121 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 POC5Q8NA72 575 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 DDB2Q92466 427 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 GINS4Q9BRT9 223 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 ZNF355PQ9NSJ1 428 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 U3KQK5 164 aa17.3■□□□□ 0.36
KDELR3-202ENST00000409006 HUWE1Q7Z6Z7 4374 aaKnown RBP17.29■□□□□ 0.36
KDELR3-202ENST00000409006 LINC00473A8K010 186 aa17.29■□□□□ 0.36
KDELR3-202ENST00000409006 SHOXO15266 292 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms