RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 CDKN1AP38936 164 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 ERVK-16P61578 105 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 RPL30P62888 115 aaKnown RBP8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 IFITM2Q01629 132 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 RTL8BQ17RB0 113 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 AVPI1Q5T686 147 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 PRAMEF5Q5TYX0 476 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 TEX261Q6UWH6 196 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF833PQ6ZTB9 187 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 LYG1Q8N1E2 194 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 C11orf42Q8N5U0 333 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 OR1S1Q8NH92 325 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 DDB2Q92466 427 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 GPR146Q96CH1 333 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 PHYHIPLQ96FC7 376 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 SLC25A31Q9H0C2 315 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 HEXA-AS1Q9H8Q6 139 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 UNKLQ9H9P5 680 aaKnown RBP8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 PLSCR3Q9NRY6 295 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 BOLA1Q9Y3E2 137 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 U3KQ87 197 aa8.46□□□□□ -1.06
SNORD88C-201ENST00000408061 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 RNF222A6NCQ9 220 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 LINC00473A8K010 186 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 WRBO00258 174 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 BCL2L11O43521 198 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 ENSAO43768 121 aaKnown RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 MMP23AO75900 390 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 IGKV1-39P01597 117 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 IGKV1-5P01602 117 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 APOA2P02652 100 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 IGKV1D-39P04432 117 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 P0C879 139 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 SAA2P0DJI9 122 aaPredicted RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 RPL12P30050 165 aaKnown RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 AP2S1P53680 142 aaPredicted RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 S100A10P60903 97 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 UBA52P62987 128 aaKnown RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 VAMP2P63027 116 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 SRSF1Q07955 248 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 AARDQ4LEZ3 155 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 H2BFWTQ7Z2G1 175 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 ABHD12Q8N2K0 398 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 OR13D1Q8NGV5 346 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 OR10X1Q8NGY0 326 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 OSR1Q8TAX0 266 aaPredicted RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 C5orf30Q96GV9 206 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 CLEC7AQ9BXN2 247 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 POLR3KQ9Y2Y1 108 aaPredicted RBP8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 KPTNQ9Y664 436 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF462Q96JM2 2506 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 MALRD1Q5VYJ5 2156 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 MYO18BQ8IUG5 2567 aa8.45□□□□□ -1.06
SNORD88C-201ENST00000408061 J3QKU1 62 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 SLC31A2O15432 143 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 FOXH1O75593 365 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 IGHV2-5P01817 119 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 FGF2P09038 288 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 PRTN3P24158 256 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 SSTR2P30874 369 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 RAB13P51153 203 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 BRWD1-AS2P59051 145 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 RPL23AP62750 156 aaKnown RBP8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 BAXQ07812 192 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 EIF5AL1Q6IS14 154 aaKnown RBP8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 OR8H1Q8NGG4 311 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 OR5AN1Q8NGI8 311 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 ST6GALNAC6Q969X2 333 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 R3HDM4Q96D70 268 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 CIB3Q96Q77 187 aaPredicted RBP8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 PIMREGQ9BSJ6 248 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 GSX2Q9BZM3 304 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 OR5AC2Q9NZP5 309 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 LSM5Q9Y4Y9 91 aaKnown RBP8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 WSB1Q9Y6I7 421 aa8.44□□□□□ -1.06
SNORD88C-201ENST00000408061 MEX3AA1L020 520 aaKnown RBP8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 MARCH11A6NNE9 402 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 SYNGR2O43760 224 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 FCGR3BO75015 233 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 JTBO76095 146 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 LY6HO94772 140 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 S1PR2O95136 353 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 SCGB1D2O95969 90 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 KRASP01116 189 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 IGLV1-47P01700 117 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 IGHV4-39P01824 125 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 HKR1P10072 659 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 EPHA1P21709 976 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 CEACAM3P40198 252 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 GNG10P50151 68 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 MIDNQ504T8 468 aa8.43□□□□□ -1.06
SNORD88C-201ENST00000408061 PDLIM3Q53GG5 364 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms