RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 RPS16P62249 146 aaKnown RBP14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 C9orf66Q5T8R8 295 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 C11orf87Q6NUJ2 197 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 OR10J5Q8NHC4 309 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 OR2D2Q9H210 308 aa14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 FOXA2Q9Y261 457 aaPredicted RBP14.96□□□□□ -0.01
SMARCB1-204ENST00000407422 TRBV6-7A0A0A0MS04 114 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 CA2P00918 260 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 ZNF616Q08AN1 781 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 PPP1R27Q86WC6 154 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 C5orf30Q96GV9 206 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 TXNL4BQ9NX01 149 aaKnown RBP14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 SORL1Q92673 2214 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 IGKV1D-8A0A087WSZ0 117 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 METTL21EPA6NDL7 271 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 SLC25A17O43808 307 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 APOA2P02652 100 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 ZNF260Q3ZCT1 412 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 ZNF562Q6V9R5 426 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 PDPNQ86YL7 162 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 TSNAXQ99598 290 aaKnown RBP14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 ATG5Q9H1Y0 275 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 SDHAF2Q9NX18 166 aa14.95□□□□□ -0.02
SMARCB1-204ENST00000407422 RAMP3O60896 148 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 OR8U8P0C7N1 319 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 FGF9P31371 208 aaPredicted RBP14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 ARFRP1Q13795 201 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 ACTBL2Q562R1 376 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 UNQ5815/PRO19632Q6UWF5 114 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 TCTEX1D1Q8N7M0 179 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 LFNGQ8NES3 379 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 FLYWCH2Q96CP2 140 aaKnown RBP14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 PRR25Q96S07 402 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 SLC35D1Q9NTN3 355 aa14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 ZMAT5Q9UDW3 170 aaKnown RBP14.94□□□□□ -0.02
SMARCB1-204ENST00000407422 TNCP24821 2201 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 SPDEFO95238 335 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 ECI1P42126 302 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 CD69Q07108 199 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 TMEM267Q0VDI3 215 aaPredicted RBP14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 AKIRIN2Q53H80 203 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 MS4A10Q96PG2 267 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 STUB1Q9UNE7 303 aa14.93□□□□□ -0.02
SMARCB1-204ENST00000407422 NOTOA8MTQ0 251 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 ARPC1BO15143 372 aaKnown RBP14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 DIRAS3O95661 229 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 IGLV2-23P01705 113 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 TALDO1P37837 337 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 SSBP2P81877 361 aaPredicted RBP14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 PJVKQ0ZLH3 352 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 DCUN1D4Q92564 292 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 B9D2Q9BPU9 175 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 Q9H521 79 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 SLURP1P55000 103 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 FXYD3Q14802 87 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 CDNFQ49AH0 187 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 VAX1Q5SQQ9 334 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 GRPEL2Q8TAA5 225 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 FCGR1BQ92637 280 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 ARPC1AQ92747 370 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 GINS4Q9BRT9 223 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 DAPK2Q9UIK4 370 aa14.92□□□□□ -0.02
SMARCB1-204ENST00000407422 TENM3Q9P273 2699 aa14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 IGHV3-11P01762 117 aa14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 LGALS1P09382 135 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 SRSF7Q16629 238 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 Q6ZS49 121 aa14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 H1FOOQ8IZA3 346 aaPredicted RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 DLX4Q92988 240 aaPredicted RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 YTHDF1Q9BYJ9 559 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 OR51E2Q9H255 320 aa14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 LSM4Q9Y4Z0 139 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 RBM7Q9Y580 266 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-204ENST00000407422 IGHV4OR15-8A0A075B7B6 117 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 A0A087WW49 117 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 SRRM4A7MD48 611 aaKnown RBP14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 CRYGBP07316 175 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 PYHIN1Q6K0P9 492 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 BVESQ8NE79 360 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 HARBI1Q96MB7 349 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 RNF167Q9H6Y7 350 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 SSR3Q9UNL2 185 aa14.9□□□□□ -0.02
SMARCB1-204ENST00000407422 LINC01619G3V211 115 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 J3QRK9 145 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 DTYMKP23919 212 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 LGALS7P47929 136 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 TPPP2P59282 170 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 HACD4Q5VWC8 232 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 ZNF773Q6PK81 442 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 TPRA1Q86W33 373 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 ST6GALNAC5Q9BVH7 336 aa14.89□□□□□ -0.03
SMARCB1-204ENST00000407422 OVOL1O14753 267 aa14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 CNIH1O95406 144 aa14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 CLEC2LP0C7M8 214 aa14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 SDC2P34741 201 aa14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 DCTN2Q13561 401 aaKnown RBP14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 SFXN4Q6P4A7 337 aa14.88□□□□□ -0.03
SMARCB1-204ENST00000407422 OR5T1Q8NG75 326 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms