RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OR2B11Q5JQS5 317 aa16.58■□□□□ 0.24
CHKB-201ENST00000406938 IGHV1-69DA0A0B4J2H0 117 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 NPFFO15130 113 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 IGHV1-69P01742 117 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 CT45A6P0DMU7 189 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 CT45A5P0DMU8 189 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 CT45A7P0DMV0 189 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 CEACAM3P40198 252 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 THBS3P49746 956 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 KRTAP1-1Q07627 177 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 TMEM187Q14656 261 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 ANKRD55Q3KP44 614 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 MIDNQ504T8 468 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 TPTE2P1Q5T6R2 138 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 MINOS1Q5TGZ0 78 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 GPR157Q5UAW9 335 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 RUSC1-AS1Q66K80 236 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 PIP4P2Q8N4L2 257 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 ZNF383Q8NA42 475 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 GLYATL2Q8WU03 294 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 MITD1Q8WV92 249 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 DDB2Q92466 427 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 TBL2Q9Y4P3 447 aaKnown RBP16.57■□□□□ 0.24
CHKB-201ENST00000406938 MINOS1-NBL1R4GNA1 71 aa16.57■□□□□ 0.24
CHKB-201ENST00000406938 KLF17Q5JT82 389 aaPredicted RBP16.56■□□□□ 0.24
CHKB-201ENST00000406938 LIN54Q6MZP7 749 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 C17orf50Q8WW18 174 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 ADTRPQ96IZ2 230 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 TMEM222Q9H0R3 208 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 HILPDAQ9Y5L2 63 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 A8MV72 311 aaPredicted RBP16.56■□□□□ 0.24
CHKB-201ENST00000406938 SSNA1O43805 119 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 RAMP3O60896 148 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 B3GALNT1O75752 331 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 UCP1P25874 307 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 BRWD1-AS2P59051 145 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 ZNF816Q0VGE8 651 aaPredicted RBP16.56■□□□□ 0.24
CHKB-201ENST00000406938 BRD3OSQ6XYD6 125 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 SPAG16Q8N0X2 631 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 CADM3Q8N126 398 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 PHB2Q99623 299 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 NABP2Q9BQ15 211 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 PRELID3BQ9Y3B1 194 aa16.56■□□□□ 0.24
CHKB-201ENST00000406938 ABCA1O95477 2261 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 IGHV1-3A0A0C4DH29 117 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 TXNL1O43396 289 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 GAPDHP04406 335 aaKnown RBP16.55■□□□□ 0.24
CHKB-201ENST00000406938 LIAT1Q6ZQX7 453 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 C12orf45Q8N5I9 185 aaPredicted RBP16.55■□□□□ 0.24
CHKB-201ENST00000406938 COQ8AQ8NI60 647 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 C18orf12Q96KH6 178 aa16.55■□□□□ 0.24
CHKB-201ENST00000406938 CELSR1Q9NYQ6 3014 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 A0A1W2PPI3 338 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 CD5LO43866 347 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 FCGR3BO75015 233 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 SERPINE2P07093 398 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 EPHA1P21709 976 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 PAX6P26367 422 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 SSX2Q16385 188 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 ZNF585BQ52M93 769 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 DYNAPQ8N1N2 210 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 TCTEX1D1Q8N7M0 179 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 UXS1Q8NBZ7 420 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 LHFPL5Q8TAF8 219 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 AJUBAQ96IF1 538 aa16.54■□□□□ 0.24
CHKB-201ENST00000406938 H0YJW9 148 aa16.53■□□□□ 0.24
CHKB-201ENST00000406938 SRPXP78539 464 aa16.53■□□□□ 0.24
CHKB-201ENST00000406938 OR5AN1Q8NGI8 311 aa16.53■□□□□ 0.24
CHKB-201ENST00000406938 RBMXL1Q96E39 390 aaKnown RBP16.53■□□□□ 0.24
CHKB-201ENST00000406938 APOA2P02652 100 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 KIR2DS2P43631 304 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 BCAP31P51572 246 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 SPNS3Q6ZMD2 512 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 LGI3Q8N145 548 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 CD300LFQ8TDQ1 290 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 MALSU1Q96EH3 234 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 TMEM56Q96MV1 263 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 MED28Q9H204 178 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 FAM212BQ9NTI7 297 aaPredicted RBP16.52■□□□□ 0.24
CHKB-201ENST00000406938 SLC35D1Q9NTN3 355 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 TMEM56-RWDD3S4R434 201 aa16.52■□□□□ 0.24
CHKB-201ENST00000406938 IGHV3-72A0A0B4J1Y9 119 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 A0A0B4J2A0 478 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 OOSP1A8MZH6 123 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 RBFOX2O43251 390 aaKnown RBP eCLIP16.52■□□□□ 0.234e-7■□□□□ 9.1
CHKB-201ENST00000406938 S1PR2O95136 353 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 CDS2O95674 445 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 LPAR6P43657 344 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 RRAS2P62070 204 aaPredicted RBP16.52■□□□□ 0.23
CHKB-201ENST00000406938 RTL8BQ17RB0 113 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 TMEM268Q5VZI3 342 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 CCDC144NLQ6NUI1 221 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 MOB3BQ86TA1 216 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 OR8H3Q8N146 312 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 LRTM2Q8N967 370 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 OR4S2Q8NH73 311 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 SHPKQ9UHJ6 478 aa16.52■□□□□ 0.23
CHKB-201ENST00000406938 DBX1A6NMT0 343 aa16.51■□□□□ 0.23
CHKB-201ENST00000406938 TIMM23O14925 209 aa16.51■□□□□ 0.23
CHKB-201ENST00000406938 FSHBP01225 129 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms