RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SECTM1Q8WVN6 248 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 WFDC12Q8WWY7 111 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 MOB3AQ96BX8 217 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 WDR12Q9GZL7 423 aaKnown RBP8.47□□□□□ -1.05
RPAIN-204ENST00000405578 SRRQ9GZT4 340 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 SLC5A7Q9GZV3 580 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 TCF19Q9Y242 345 aa8.47□□□□□ -1.05
RPAIN-204ENST00000405578 ANKRD20A5PA0PJZ0 165 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 CENPXA8MT69 81 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 H7C2Y5 167 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 M0QZ24 198 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 M0QZK8 103 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 CD74P04233 296 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 AMY2AP04746 511 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 ECI1P42126 302 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 THBS3P49746 956 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 ZNF846Q147U1 533 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 LY6EQ16553 131 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 RTL8BQ17RB0 113 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 SCGB2B2Q4G0G5 96 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 RPL39P5Q59GN2 51 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 C16orf82Q7Z2V1 217 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 OR8H1Q8NGG4 311 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 PRRT1Q99946 306 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 NABP2Q9BQ15 211 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
RPAIN-204ENST00000405578 CHIAQ9BZP6 476 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 TINAGL1Q9GZM7 467 aaPredicted RBP8.46□□□□□ -1.06
RPAIN-204ENST00000405578 MCUBQ9NWR8 336 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 SDHAF2Q9NX18 166 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 SCP2D1Q9UJQ7 156 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 PRELID3BQ9Y3B1 194 aa8.46□□□□□ -1.06
RPAIN-204ENST00000405578 GPR137BO60478 399 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 MOSP00540 346 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 IGKV1D-33P01593 117 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 IGKV1-33P01594 117 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 SNRNP70P08621 437 aaKnown RBP8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CT45A6P0DMU7 189 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CT45A5P0DMU8 189 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CT45A7P0DMV0 189 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 RRASP10301 218 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 TMEM11P17152 192 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CATR1Q13166 79 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 LSAMPQ13449 338 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 HABP2Q14520 560 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-204ENST00000405578 ZNF660Q6AZW8 331 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-204ENST00000405578 DHRS7BQ6IAN0 325 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-204ENST00000405578 ZNF66Q6ZN08 573 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 SLC38A6Q8IZM9 456 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 POC5Q8NA72 575 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 TERB2Q8NHR7 220 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CFHR4Q92496 578 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 SCGB3A2Q96PL1 93 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 HSD17B10Q99714 261 aaKnown RBP8.45□□□□□ -1.06
RPAIN-204ENST00000405578 ZNF251Q9BRH9 671 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 CCDC32Q9BV29 185 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 AKIP1Q9NQ31 210 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 WASHC3Q9Y3C0 194 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 KIAA2026Q5HYC2 2103 aa8.45□□□□□ -1.06
RPAIN-204ENST00000405578 IGHV3-72A0A0B4J1Y9 119 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 A6NDX4 124 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 FAM90A9PA6NNJ1 464 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 GPR31O00270 319 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 OR2F2O95006 317 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 PGAM2P15259 253 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 CD24P25063 80 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 CD40LGP29965 261 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 PPP5CP53041 499 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 UCP3P55916 312 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 EBI3Q14213 229 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 HNF4GQ14541 408 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 ABCA11PQ4W5N1 156 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 KCTD9Q7L273 389 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 PDPNQ86YL7 162 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 DRAXINQ8NBI3 349 aaPredicted RBP8.44□□□□□ -1.06
RPAIN-204ENST00000405578 OR5AN1Q8NGI8 311 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 ZFAND1Q8TCF1 268 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 PIFOQ8TCI5 191 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 TRIM63Q969Q1 353 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 CCL28Q9NRJ3 127 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 SLC35D1Q9NTN3 355 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 MMP24Q9Y5R2 645 aa8.44□□□□□ -1.06
RPAIN-204ENST00000405578 FAM181BA6NEQ2 426 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 NAP1L6A6NFF2 107 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 NCBP2LA6PVI3 153 aaKnown RBP8.43□□□□□ -1.06
RPAIN-204ENST00000405578 H0YJW9 148 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 PLXNB1O43157 2135 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 IL7P13232 177 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 GNRHRP30968 328 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 DUTP33316 252 aaKnown RBP8.43□□□□□ -1.06
RPAIN-204ENST00000405578 KIR2DS2P43631 304 aa8.43□□□□□ -1.06
RPAIN-204ENST00000405578 KLF9Q13886 244 aaPredicted RBP8.43□□□□□ -1.06
RPAIN-204ENST00000405578 SURF2Q15527 256 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms