RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 MRPL20Q9BYC9 149 aaKnown RBP9.92□□□□□ -0.82
LINC00339-201ENST00000404210 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 LINC00473A8K010 186 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 TIMM23O14925 209 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 TNFSF12O43508 249 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 PI3P19957 117 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 DHODHQ02127 395 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 EBI3Q14213 229 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 LRRC75BQ2VPJ9 315 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 GLDNQ6ZMI3 551 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 KCTD9Q7L273 389 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 NRARPQ7Z6K4 114 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 ZNF48Q96MX3 618 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 SSX3Q99909 188 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 ALX4Q9H161 411 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 FAM212BQ9NTI7 297 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-201ENST00000404210 PRELID3BQ9Y3B1 194 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 NUBP2Q9Y5Y2 271 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 HIVEP2P31629 2446 aa9.91□□□□□ -0.82
LINC00339-201ENST00000404210 H0YJW9 148 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 B3GALNT1O75752 331 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 PTTG1O95997 202 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 APOA2P02652 100 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 RLN1P04808 185 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 FAM157CP0CG43 387 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 FAM106CPP0CH98 169 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 F2RP25116 425 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 PAX6P26367 422 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 IER3P46695 156 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 MECP2P51608 486 aaKnown RBP9.9□□□□□ -0.82
LINC00339-201ENST00000404210 LINC00205P59089 165 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 TAS2R31P59538 309 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.82
LINC00339-201ENST00000404210 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 C11orf88Q6PI97 169 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 SLC25A42Q86VD7 318 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 CENPSQ8N2Z9 138 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 ADAD2Q8NCV1 583 aaKnown RBP9.9□□□□□ -0.82
LINC00339-201ENST00000404210 PIFOQ8TCI5 191 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 RNF5Q99942 180 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 KCNIP3Q9Y2W7 256 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 F8P00451 2351 aa9.9□□□□□ -0.82
LINC00339-201ENST00000404210 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 TEX13DA0A0J9YY54 714 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-201ENST00000404210 MDFIC2A0A1B0GVS7 189 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 CRYM-AS1A6NIL9 109 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 ARPC1BO15143 372 aaKnown RBP9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RBFOX2O43251 390 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00339-201ENST00000404210 H2AFB2P0C5Z0 115 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 AKR1C4P17516 323 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RAB13P51153 203 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RAG2P55895 527 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RGS21Q2M5E4 152 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 PLET1Q6UQ28 207 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 RBMS3Q6XE24 437 aaKnown RBP9.89□□□□□ -0.83
LINC00339-201ENST00000404210 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 SGPP2Q8IWX5 399 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 OR2T10Q8NGZ9 312 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 OR5R1Q8NH85 324 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 CAPSLQ8WWF8 208 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM230Q96A57 120 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 GALNT14Q96FL9 552 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 C20orf85Q9H1P6 137 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 NAA60Q9H7X0 242 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
LINC00339-201ENST00000404210 TLN2Q9Y4G6 2542 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 TRAV6A0A075B6T7 132 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 C3orf85A0A1B0GTC6 90 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 H7C2Y5 167 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 FCGR3BO75015 233 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 VENTXO95231 258 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 HPRT1P00492 218 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 MOSP00540 346 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 CBX3Q13185 183 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM177Q53S58 311 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 DHRS7BQ6IAN0 325 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 SPAG16Q8N0X2 631 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 OR4C13Q8NGP0 309 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 OR51H1Q8NH63 302 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 ZNF418Q8TF45 676 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms