RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
RBM39-206ENST00000403542 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 DPPA3Q6W0C5 159 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
RBM39-206ENST00000403542 HAND1O96004 215 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 IFNA1P01562 189 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 AMBPP02760 352 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 OPN1MWP04001 364 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 OPN1MW2P0DN77 364 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 OPN1MW3P0DN78 364 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 DDTP30046 118 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 FABP6P51161 128 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 PPP1CBP62140 327 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 GNB2P62879 340 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 TGFBR3Q03167 851 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
RBM39-206ENST00000403542 SRSF7Q16629 238 aaKnown RBP eCLIP10.06□□□□□ -0.85e-7■■■□□ 16.7
RBM39-206ENST00000403542 Q3ZCU0 254 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
RBM39-206ENST00000403542 NAT8Q9UHE5 227 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 PLCE1Q9P212 2302 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 SH2D1BO14796 132 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 SS18L1O75177 396 aaPredicted RBP10.05□□□□□ -0.8
RBM39-206ENST00000403542 IGHEP01854 428 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 RAC2P15153 192 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 CD33P20138 364 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 SERF2P84101 59 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 PSG7Q13046 419 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
RBM39-206ENST00000403542 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
RBM39-206ENST00000403542 CNEP1R1Q8N9A8 125 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 DTD1Q8TEA8 209 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 OR5B12Q96R08 314 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 OPA3Q9H6K4 179 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 PSG11Q9UQ72 335 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 HBZP02008 142 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 RND2P52198 227 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 BRWD1-AS2P59051 145 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 NINJ1Q92982 152 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 GALMQ96C23 342 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 CDH20Q9HBT6 801 aa10.05□□□□□ -0.8
RBM39-206ENST00000403542 LINC00473A8K010 186 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 MPLP40238 635 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TBC1D28Q2M2D7 210 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 ZNF709Q8N972 641 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TNCP24821 2201 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 KBTBD11O94819 623 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 GYPAP02724 150 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 NDUFB7P17568 137 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 NPPCP23582 126 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 ATP5G3P48201 142 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 PMS2P11Q13670 270 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 SLC10A1Q14973 349 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 FBXW9Q5XUX1 488 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 H2BFWTQ7Z2G1 175 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 BCL2L2Q92843 193 aaPredicted RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 POLEQ07864 2286 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TECTAO75443 2155 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 ELOA3CA0A087WX78 387 aaPredicted RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 LRRC30A6NM36 301 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 SMPD2O60906 423 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 PFN1P07737 140 aaKnown RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 UBE2NP61088 152 aaKnown RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 FAM78BQ5VT40 261 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
RBM39-206ENST00000403542 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
RBM39-206ENST00000403542 TNRC6AQ8NDV7 1962 aaKnown RBP10.03□□□□□ -0.8
RBM39-206ENST00000403542 B4E171 279 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 C11orf94C9JXX5 98 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 GZMBP10144 247 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 COX5BP10606 129 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 TSPAN7P41732 249 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 CYP2G1PQ6ZSU1 146 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 OR1P1Q8NH06 330 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 PKIBQ9C010 78 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 SPRR3Q9UBC9 169 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 PCNX1Q96RV3 2341 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 TRBV6-6A0A0A6YYG2 114 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 NDUFB4O95168 129 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 SLC25A6P12236 298 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 DHRS13Q6UX07 377 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 TCF23Q7RTU1 214 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 MRPL41Q8IXM3 137 aaKnown RBP10.03□□□□□ -0.8
RBM39-206ENST00000403542 ZNF645Q8N7E2 425 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 OR13A1Q8NGR1 328 aa10.03□□□□□ -0.8
RBM39-206ENST00000403542 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms