RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ZNF580Q9UK33 172 aa15.14■□□□□ 0.01
RTN4-207ENST00000402434 MRPS7Q9Y2R9 242 aaKnown RBP15.14■□□□□ 0.01
RTN4-207ENST00000402434 PLXNB1O43157 2135 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 TPPPO94811 219 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 IGF1P05019 195 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 FCER2P06734 321 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 OR5H8P0DN80 308 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 FCGR2CP31995 323 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 DUTP33316 252 aaKnown RBP15.13■□□□□ 0.01
RTN4-207ENST00000402434 THBS3P49746 956 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 OR4X2Q8NGF9 303 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 DYNC2LI1Q8TCX1 351 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 GPX8Q8TED1 209 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 DDB2Q92466 427 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
RTN4-207ENST00000402434 ADTRPQ96IZ2 230 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 SCPEP1Q9HB40 452 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 SLC35D1Q9NTN3 355 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 ADAM30Q9UKF2 790 aa15.13■□□□□ 0.01
RTN4-207ENST00000402434 J3QRK9 145 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 CDK10Q15131 360 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 ZNF329Q86UD4 541 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 GIMAP1Q8WWP7 306 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 ISOC1Q96CN7 298 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 FBXL15Q9H469 300 aa15.12■□□□□ 0.01
RTN4-207ENST00000402434 IGHV7-81A0A0B4J1V7 117 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 FAM25AB3EWG3 89 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 FAM25CB3EWG5 89 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 FAM25GB3EWG6 89 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 H3BMQ9 156 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 SPDEFO95238 335 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 OPN1MWP04001 364 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 OPN1MW2P0DN77 364 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 OPN1MW3P0DN78 364 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 RPS16P62249 146 aaKnown RBP15.11■□□□□ 0.01
RTN4-207ENST00000402434 SLC35B1P78383 322 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 OVCH2Q7RTZ1 564 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 LYSMD2Q8IV50 215 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 COMMD1Q8N668 190 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 TSNAXQ99598 290 aaKnown RBP15.11■□□□□ 0.01
RTN4-207ENST00000402434 GON7Q9BXV9 100 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 RBMX2Q9Y388 322 aaKnown RBP15.11■□□□□ 0.01
RTN4-207ENST00000402434 TSSC4Q9Y5U2 329 aaPredicted RBP15.11■□□□□ 0.01
RTN4-207ENST00000402434 CEPT1Q9Y6K0 416 aa15.11■□□□□ 0.01
RTN4-207ENST00000402434 TCRBV4S1A1TA0A5B7 111 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 LINC00473A8K010 186 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 SULT1C2O00338 296 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 PPYP01298 95 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 RRASP10301 218 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 AADACP22760 399 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 LGALS7P47929 136 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 PSG5Q15238 335 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 MSMO1Q15800 293 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 RTL8BQ17RB0 113 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 NSUN5P1Q3KNT7 163 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 DHRS11Q6UWP2 260 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 SNX29P2Q8IUI4 249 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 MIXL1Q9H2W2 232 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 OR51J1Q9H342 316 aa15.1■□□□□ 0.01
RTN4-207ENST00000402434 CCDC59Q9P031 241 aaKnown RBP15.1■□□□□ 0.01
RTN4-207ENST00000402434 CTDSP2O14595 271 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 NOL3O60936 208 aaKnown RBP15.09■□□□□ 0.01
RTN4-207ENST00000402434 RFX2P48378 723 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 TAS2R46P59540 309 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 CFHR3Q02985 330 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 EIF4EBP1Q13541 118 aaPredicted RBP15.09■□□□□ 0.01
RTN4-207ENST00000402434 DYRK1AQ13627 763 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 TMEM177Q53S58 311 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 ZNF660Q6AZW8 331 aaPredicted RBP15.09■□□□□ 0.01
RTN4-207ENST00000402434 BVESQ8NE79 360 aa15.09■□□□□ 0.01
RTN4-207ENST00000402434 FCN1O00602 326 aa15.08■□□□□ 0.01
RTN4-207ENST00000402434 IGLV2-23P01705 113 aa15.08■□□□□ 0.01
RTN4-207ENST00000402434 CX3CL1P78423 397 aa15.08■□□□□ 0.01
RTN4-207ENST00000402434 HSD17B10Q99714 261 aaKnown RBP15.08■□□□□ 0.01
RTN4-207ENST00000402434 EXTL2Q9UBQ6 330 aa15.08■□□□□ 0.01
RTN4-207ENST00000402434 RGS5O15539 181 aa15.08■□□□□ 0
RTN4-207ENST00000402434 CBX3Q13185 183 aa15.08■□□□□ 0
RTN4-207ENST00000402434 PLGLAQ15195 96 aa15.08■□□□□ 0
RTN4-207ENST00000402434 TEX38Q6PEX7 206 aa15.08■□□□□ 0
RTN4-207ENST00000402434 OR4F17Q8NGA8 305 aa15.08■□□□□ 0
RTN4-207ENST00000402434 FAM110DQ8TAY7 271 aaPredicted RBP15.08■□□□□ 0
RTN4-207ENST00000402434 C15orf40Q8WUR7 153 aa15.08■□□□□ 0
RTN4-207ENST00000402434 SECTM1Q8WVN6 248 aa15.08■□□□□ 0
RTN4-207ENST00000402434 OR4F4Q96R69 305 aa15.08■□□□□ 0
RTN4-207ENST00000402434 ABHD1Q96SE0 405 aa15.08■□□□□ 0
RTN4-207ENST00000402434 SLIRPQ9GZT3 109 aaKnown RBP15.08■□□□□ 0
RTN4-207ENST00000402434 EHFQ9NZC4 300 aa15.08■□□□□ 0
RTN4-207ENST00000402434 METTL1Q9UBP6 276 aaKnown RBP15.08■□□□□ 0
RTN4-207ENST00000402434 SRRM4A7MD48 611 aaKnown RBP15.07■□□□□ 0
RTN4-207ENST00000402434 ATP6V0E1O15342 81 aa15.07■□□□□ 0
RTN4-207ENST00000402434 SLC25A17O43808 307 aa15.07■□□□□ 0
RTN4-207ENST00000402434 IGHG4P01861 327 aa15.07■□□□□ 0
RTN4-207ENST00000402434 PMP2P02689 132 aa15.07■□□□□ 0
RTN4-207ENST00000402434 CRYGBP07316 175 aa15.07■□□□□ 0
RTN4-207ENST00000402434 PPIFP30405 207 aaKnown RBP15.07■□□□□ 0
RTN4-207ENST00000402434 RPL30P62888 115 aaKnown RBP15.07■□□□□ 0
RTN4-207ENST00000402434 NDPQ00604 133 aa15.07■□□□□ 0
RTN4-207ENST00000402434 ZNF562Q6V9R5 426 aa15.07■□□□□ 0
RTN4-207ENST00000402434 ZNF66Q6ZN08 573 aa15.07■□□□□ 0
RTN4-207ENST00000402434 KCTD9Q7L273 389 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms