RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 WDR25Q64LD2 544 aaPredicted RBP21■□□□□ 0.95
CPNE1-205ENST00000401607 F5H0A9 414 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-205ENST00000401607 KRASP01116 189 aa20.99■□□□□ 0.95
CPNE1-205ENST00000401607 SRSF1Q07955 248 aaKnown RBP eCLIP20.99■□□□□ 0.953e-6■□□□□ 9.1
CPNE1-205ENST00000401607 CD300LFQ8TDQ1 290 aa20.99■□□□□ 0.95
CPNE1-205ENST00000401607 SPOCK3Q9BQ16 436 aa20.99■□□□□ 0.95
CPNE1-205ENST00000401607 ZFYVE26Q68DK2 2539 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 SSSCA1O60232 199 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 FCGR3BO75015 233 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 EFNA4P52798 201 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 TLE4Q04727 773 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 ALKAL2Q6UX46 152 aa20.98■□□□□ 0.95
CPNE1-205ENST00000401607 OVOL3O00110 214 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 OR8H3Q8N146 312 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 C8orf46Q8TAG6 207 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 RAB39BQ96DA2 213 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 A0A087X0M5 115 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 A0A1B0GX30 115 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 RBFOX2O43251 390 aaKnown RBP eCLIP20.97■□□□□ 0.957e-8■■■■□ 26.3
CPNE1-205ENST00000401607 ATG12O94817 140 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 IGHV1-8P0DP01 117 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 ZNF596Q8TC21 504 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 IGFBPL1Q8WX77 278 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 PATZ1Q9HBE1 687 aaKnown RBP20.97■□□□□ 0.95
CPNE1-205ENST00000401607 COA4Q9NYJ1 87 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 DCHS2Q6V1P9 2916 aa20.97■□□□□ 0.95
CPNE1-205ENST00000401607 RPS10-NUDT3A0A1W2PQS6 291 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 GPR137BO60478 399 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 THBS3P49746 956 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 MIDNQ504T8 468 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 S1PR3Q99500 378 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 ZC4H2Q9NQZ6 224 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 PRELID3BQ9Y3B1 194 aa20.96■□□□□ 0.95
CPNE1-205ENST00000401607 TMEM50AO95807 157 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 HPRT1P00492 218 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 C8orf31Q8N9H6 132 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 ZNF383Q8NA42 475 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 SCARB1Q8WTV0 552 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 BSCL2Q96G97 398 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-205ENST00000401607 CHST1O43916 411 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 MMP9P14780 707 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 PVALBP20472 110 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-205ENST00000401607 KIR2DS2P43631 304 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 GPR6P46095 362 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-205ENST00000401607 GPR157Q5UAW9 335 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 ZNF833PQ6ZTB9 187 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 LINC00311Q8N616 119 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 STOML3Q8TAV4 291 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 R3HDM4Q96D70 268 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 NARFLQ9H6Q4 476 aa20.95■□□□□ 0.94
CPNE1-205ENST00000401607 DOPEY1Q5JWR5 2465 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 MARCH11A6NNE9 402 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 J3QR06 171 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 PAX9P55771 341 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 CLEC9AQ6UXN8 241 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 ZNF295-AS1Q8N0V1 137 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 OR2C3Q8N628 320 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 LY6G5BQ8NDX9 201 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 PCNPQ8WW12 178 aaKnown RBP20.94■□□□□ 0.94
CPNE1-205ENST00000401607 ADTRPQ96IZ2 230 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 FBXL17Q9UF56 701 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 SESN1Q9Y6P5 492 aa20.94■□□□□ 0.94
CPNE1-205ENST00000401607 PPIAL4CA0A0B4J2A2 164 aa20.93■□□□□ 0.94
CPNE1-205ENST00000401607 FAM24AA6NFZ4 105 aa20.93■□□□□ 0.94
CPNE1-205ENST00000401607 C22orf46C9J442 243 aa20.93■□□□□ 0.94
CPNE1-205ENST00000401607 WRBO00258 174 aa20.93■□□□□ 0.94
CPNE1-205ENST00000401607 PPIAL4GP0DN37 164 aa20.93■□□□□ 0.94
CPNE1-205ENST00000401607 TOR1AO14656 332 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 TAAR5O14804 337 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 CT45A6P0DMU7 189 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 CT45A5P0DMU8 189 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 CT45A7P0DMV0 189 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 GNB2P62879 340 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 VAMP2P63027 116 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 CLLU1Q5K131 121 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 H2BFWTQ7Z2G1 175 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 GSX2Q9BZM3 304 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 TMEM133Q9H2Q1 129 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 LYRM2Q9NU23 88 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-205ENST00000401607 IGSF23A1L1A6 192 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 EWSR1Q01844 656 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPNE1-205ENST00000401607 OR4S2Q8NH73 311 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 OR9G1Q8NH87 305 aa20.92■□□□□ 0.94
CPNE1-205ENST00000401607 DOCK11Q5JSL3 2073 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 MALRD1Q5VYJ5 2156 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 A0A1W2PPH5 198 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 CAV2P51636 162 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 NHLH2Q02577 135 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 ABHD12Q8N2K0 398 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 SMIM3Q9BZL3 60 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 ITGB1BP2Q9UKP3 347 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 EPG5Q9HCE0 2579 aa20.91■□□□□ 0.94
CPNE1-205ENST00000401607 ZNF462Q96JM2 2506 aa20.9■□□□□ 0.94
CPNE1-205ENST00000401607 FAM90A26D6RGX4 464 aa20.9■□□□□ 0.94
CPNE1-205ENST00000401607 SYNGR2O43760 224 aa20.9■□□□□ 0.94
CPNE1-205ENST00000401607 RBP4P02753 201 aa20.9■□□□□ 0.94
CPNE1-205ENST00000401607 TPT1P13693 172 aaKnown RBP20.9■□□□□ 0.94
CPNE1-205ENST00000401607 RPL7L1Q6DKI1 246 aaKnown RBP20.9■□□□□ 0.94
CPNE1-205ENST00000401607 SSBP3Q9BWW4 388 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-205ENST00000401607 DLX1P56177 255 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms