RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 CRTAPO75718 401 aaPredicted RBP13.4□□□□□ -0.26
UFD1-202ENST00000399523 APOA2P02652 100 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 OR9G9P0C7N8 305 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 APOC4P55056 127 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 ZNF57Q68EA5 555 aaPredicted RBP13.4□□□□□ -0.26
UFD1-202ENST00000399523 AWAT2Q6E213 333 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 SVOPQ8N4V2 548 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 JAGN1Q8N5M9 183 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 THRSPQ92748 146 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 RNF183Q96D59 192 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 TRAV8-7A0A075B6U6 113 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 TUSC2O75896 110 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 APELAP0DMC3 54 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 GNGT1P63211 74 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 MRGPRG-AS1Q2M3A8 158 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 FAM209BQ5JX69 171 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 ZNF880Q6PDB4 577 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 CDH26Q8IXH8 852 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 EDARADDQ8WWZ3 215 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 PTX4Q96A99 478 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 CKLFQ9UBR5 152 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 OAZ3Q9UMX2 235 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 SELENOKQ9Y6D0 94 aa13.39□□□□□ -0.27
UFD1-202ENST00000399523 TRBV5-5A0A0J9YX44 114 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 NAPSAO96009 420 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 LIMS3P0CW19 117 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 LIMS4P0CW20 117 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 GABRB1P18505 474 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 CEACAM6P40199 344 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 ZNF45Q02386 682 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 DNAL1Q4LDG9 190 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 OR13C5Q8NGS8 318 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 CACNG8Q8WXS5 425 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 PHB2Q99623 299 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 FAAP24Q9BTP7 215 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 KRTAP4-5Q9BYR2 181 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 MLXQ9UH92 298 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 AP4S1Q9Y587 144 aa13.38□□□□□ -0.27
UFD1-202ENST00000399523 PPP5D1E7EU14 171 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 GYG2O15488 501 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 OGG1O15527 345 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 GGCTO75223 188 aaKnown RBP13.37□□□□□ -0.27
UFD1-202ENST00000399523 OR2C1O95371 312 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 HLA-AP01891 365 aaKnown RBP13.37□□□□□ -0.27
UFD1-202ENST00000399523 PRH1P02810 166 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 AMBNQ9NP70 447 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 SLC35D1Q9NTN3 355 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 MRPS18AQ9NVS2 196 aaKnown RBP13.37□□□□□ -0.27
UFD1-202ENST00000399523 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
UFD1-202ENST00000399523 KIR2DL5BA0A0G2JN68 375 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 KIR2DL5BA0A0G2JPC4 375 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
UFD1-202ENST00000399523 ZBTB25P24278 435 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 TCTAP57738 103 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 KIR2DL5AQ8N109 375 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 NECAP1Q8NC96 275 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 KIR2DL5BQ8NHK3 375 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 SMIM19Q96E16 107 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 NEDD4LQ96PU5 975 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 OR1A1Q9P1Q5 309 aa13.36□□□□□ -0.27
UFD1-202ENST00000399523 EXOSC1Q9Y3B2 195 aaKnown RBP13.36□□□□□ -0.27
UFD1-202ENST00000399523 SRRM4A7MD48 611 aaKnown RBP13.35□□□□□ -0.27
UFD1-202ENST00000399523 FCGR1AP12314 374 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 MAP2K4P45985 399 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 RPS11P62280 158 aaKnown RBP eCLIP13.35□□□□□ -0.27
UFD1-202ENST00000399523 MOB1BQ7L9L4 216 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 C6orf201Q7Z4U5 140 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 CENPNQ96H22 339 aaPredicted RBP13.35□□□□□ -0.27
UFD1-202ENST00000399523 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
UFD1-202ENST00000399523 TRBV5-7A0A0A0MS05 114 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 TRAV25A0A0B4J276 109 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 A8MWP6 167 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 ALPLP05186 524 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 C15orf32Q32M92 178 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 Q499Y3 187 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.34□□□□□ -0.27
UFD1-202ENST00000399523 SRSF12Q8WXF0 261 aaKnown RBP13.34□□□□□ -0.27
UFD1-202ENST00000399523 GHRLQ9UBU3 117 aa13.34□□□□□ -0.27
UFD1-202ENST00000399523 TRBV6-6A0A0A6YYG2 114 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 M0R1X1 148 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 MPPED1O15442 326 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 PRSS8Q16651 343 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 RHOXF1Q8NHV9 184 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 SLC7A6OSQ96CW6 309 aaPredicted RBP13.33□□□□□ -0.28
UFD1-202ENST00000399523 Q96MT0 163 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 MFFQ9GZY8 342 aa13.33□□□□□ -0.28
UFD1-202ENST00000399523 CHMP1AQ9HD42 196 aaPredicted RBP13.33□□□□□ -0.28
UFD1-202ENST00000399523 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms