RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 LINC01356Q8N9X3 169 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 C2orf50Q96LR7 162 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TMEM74BQ9NUR3 256 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TBL2Q9Y4P3 447 aaKnown RBP4.36□□□□□ -1.71
TTC3-204ENST00000399017 SAP30O75446 220 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 BGLAPP02818 100 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 NME2P22392 152 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 SLC6A1P30531 599 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 CAMPP49913 170 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ETV1P50549 477 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 EMP1P54849 157 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 CEBPEQ15744 281 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ZDHHC22Q8N966 263 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ZBTB44Q8NCP5 570 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 WDFY2Q96P53 400 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 NPIPB11E5RHQ5 1161 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 CTDSP2O14595 271 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ATP5LO75964 103 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TSPAN13O95857 204 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 C1QAP02745 245 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 CPN1P15169 458 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 MUC1P15941 1255 aaPredicted RBP4.36□□□□□ -1.71
TTC3-204ENST00000399017 EFNB2P52799 333 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 PRNTQ86SH4 94 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TMEM251Q8N6I4 163 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TMEM174Q8WUU8 243 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 A0A1W2PR80 420 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 AMBPP02760 352 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 POLR2IP36954 125 aaKnown RBP4.36□□□□□ -1.71
TTC3-204ENST00000399017 CX3CL1P78423 397 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 FDCSPQ8NFU4 85 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 MYEOVQ96EZ4 313 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 SIGLEC12Q96PQ1 595 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 TMEFF2Q9UIK5 374 aaPredicted RBP4.36□□□□□ -1.71
TTC3-204ENST00000399017 LRP12Q9Y561 859 aa4.36□□□□□ -1.71
TTC3-204ENST00000399017 A0A1B0GUS0 222 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 AP4M1O00189 453 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TRGC2P03986 189 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SLC25A16P16260 332 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SLAQ13239 276 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 C21orf62-AS1Q17RA5 79 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 ASCL4Q6XD76 172 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SSMEM1Q8WWF3 244 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 PRR14Q9BWN1 585 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TRAV1-2A0A0B4J238 106 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TCRBV3S1A0A5B6 114 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 FAM221AA4D161 298 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 CLDN34H7C241 214 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 EIF3GO75821 320 aaKnown RBP eCLIP4.35□□□□□ -1.71
TTC3-204ENST00000399017 TDGF1P3P51864 188 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SNRPNP63162 240 aaKnown RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 COL10A1Q03692 680 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 ACVR1Q04771 509 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 S100A7L2Q5SY68 101 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 Q6ZT83 130 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 C15orf53Q8NAA6 179 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 HMGCLL1Q8TB92 370 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 OR5P3Q8WZ94 311 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 LURAP1Q96LR2 239 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 NEU1Q99519 415 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TOLLIPQ9H0E2 274 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 VCX2Q9H322 139 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 DKK4Q9UBT3 224 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 PXMP4Q9Y6I8 212 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TMEM129A0AVI4 362 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TMEM235A6NFC5 223 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 IFITM5A6NNB3 132 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 ZP1P60852 638 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 PSG5Q15238 335 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 ALX4Q9H161 411 aaPredicted RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 MMP28Q9H239 520 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 C20orf141Q9NUB4 165 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 ZNF106Q9H2Y7 1883 aaKnown RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 GDF9O60383 454 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 TBX19O60806 448 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 CCL4P13236 92 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 FCGR2BP31994 310 aaPredicted RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 LPAR6P43657 344 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
TTC3-204ENST00000399017 COLCA1Q6ZS62 124 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 LRP10Q7Z4F1 713 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 ZNF645Q8N7E2 425 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 OR52I2Q8NH67 350 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 PRSS21Q9Y6M0 314 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 HMGN4O00479 90 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 CD37P11049 281 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 GALP22466 123 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 MPV17P39210 176 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 GAB4Q2WGN9 574 aa4.35□□□□□ -1.71
TTC3-204ENST00000399017 LILRA6Q6PI73 481 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms