RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 B4DGG1 531 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 ZNF324O75467 553 aaPredicted RBP12.76□□□□□ -0.37
CYLD-202ENST00000398568 IGLV3-1P01715 115 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 CTSSP25774 331 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 PLA2G5P39877 138 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
CYLD-202ENST00000398568 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 AMMECR1LQ6DCA0 310 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 A0A1W2PS18 150 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 NBEAP1P0C6P0 100 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 PSG2P11465 335 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 TIMP3P35625 211 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 ATP5G3P48201 142 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 GFRA1P56159 465 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 CLDN18P56856 261 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 MUC15Q8N387 334 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
CYLD-202ENST00000398568 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 IGHV1OR15-9A0A0B4J2B8 117 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 ODAMA1E959 279 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 NDUFS8O00217 210 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 SCTP09683 121 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
CYLD-202ENST00000398568 APOBEC3DQ96AK3 386 aaPredicted RBP12.75□□□□□ -0.37
CYLD-202ENST00000398568 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 QTRT1Q9BXR0 403 aaKnown RBP12.75□□□□□ -0.37
CYLD-202ENST00000398568 WASHC3Q9Y3C0 194 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 ADAMTS9Q9P2N4 1935 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 PSG4Q00888 419 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 RSPO4Q2I0M5 234 aaPredicted RBP12.75□□□□□ -0.37
CYLD-202ENST00000398568 OR10J3Q5JRS4 329 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 ZNF721Q8TF20 911 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 CEP250Q9BV73 2442 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 CELSR3Q9NYQ7 3312 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 PI4KAP42356 2102 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 CTXN2P0C2S0 81 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 ARF6P62330 175 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 Q6ZRM9 215 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 UHRF2Q96PU4 802 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 CHODLQ9H9P2 273 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 PLEK2Q9NYT0 353 aa12.75□□□□□ -0.37
CYLD-202ENST00000398568 SLC17A3O00476 420 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 KIAA1644Q3SXP7 199 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 TMEM131Q92545 1883 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 ARHGEF17Q96PE2 2063 aaPredicted RBP12.74□□□□□ -0.37
CYLD-202ENST00000398568 KIR2DS1A0A191URI9 304 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 SHISA8B8ZZ34 492 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 SIRPB1O00241 398 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
CYLD-202ENST00000398568 HOXC12P31275 282 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 KIR2DS4P43632 304 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 KIR2DS1Q14954 304 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 LHFPL4Q7Z7J7 247 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 ZDHHC23Q8IYP9 409 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 IGKV1-27A0A075B6S5 117 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 SAA2-SAA4A0A096LPE2 208 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 CORTO00230 105 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 CA2P00918 260 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 MT-ND6P03923 174 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 IGKV3-11P04433 115 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 REG1AP05451 166 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 DUSP3P51452 185 aaPredicted RBP12.74□□□□□ -0.37
CYLD-202ENST00000398568 ZNF83P51522 516 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 SMIM21Q3B7S5 101 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 FAM19A2Q8N3H0 131 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 GNB1LQ9BYB4 327 aa12.74□□□□□ -0.37
CYLD-202ENST00000398568 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
CYLD-202ENST00000398568 OTOGLQ3ZCN5 2332 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 A0A1W2PPV4 95 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 OR2T8A6NH00 312 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 SP9P0CG40 484 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 CD38P28907 300 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 RBM11P57052 281 aaKnown RBP12.73□□□□□ -0.37
CYLD-202ENST00000398568 PHYHD1Q5SRE7 291 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 LCN12Q6JVE5 192 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 LSM10Q969L4 123 aaKnown RBP12.73□□□□□ -0.37
CYLD-202ENST00000398568 IGKV1-12A0A0C4DH73 117 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 M0R1X1 148 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 IGKV1D-12P01611 117 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 HIST3H3Q16695 136 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 IL36GQ9NZH8 169 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
CYLD-202ENST00000398568 LGALS4P56470 323 aa12.72□□□□□ -0.37
CYLD-202ENST00000398568 RELBQ01201 579 aa12.72□□□□□ -0.37
CYLD-202ENST00000398568 Q56UQ5 140 aa12.72□□□□□ -0.37
CYLD-202ENST00000398568 ZNF324BQ6AW86 544 aaPredicted RBP12.72□□□□□ -0.37
CYLD-202ENST00000398568 Q6ZPA2 131 aa12.72□□□□□ -0.37
CYLD-202ENST00000398568 DTX1Q86Y01 620 aa12.72□□□□□ -0.37
CYLD-202ENST00000398568 TAX1BP3O14907 124 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms