RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GVQW1Q8N7I0 195 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
APTR-201ENST00000398043 GON7Q9BXV9 100 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 ZFP57Q9NU63 452 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 G3V4G9 280 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 ELANEP08246 267 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
APTR-201ENST00000398043 PSMB8P28062 276 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 C1QL4Q86Z23 238 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 MRPS26Q9BYN8 205 aaKnown RBP13.07□□□□□ -0.32
APTR-201ENST00000398043 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
APTR-201ENST00000398043 LINC00473A8K010 186 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 G3V318 75 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 SPDEFO95238 335 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 APOA2P02652 100 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 CRYGBP07316 175 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 DUTP33316 252 aaKnown RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 CX3CL1P78423 397 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 KIAA0141Q14154 515 aaPredicted RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 LCNL1Q6ZST4 164 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 SAMD12Q8N8I0 201 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 BEST4Q8NFU0 473 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 SNAPC3Q92966 411 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 S100A16Q96FQ6 103 aaKnown RBP13.06□□□□□ -0.32
APTR-201ENST00000398043 SLC35D1Q9NTN3 355 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 ANAPC10Q9UM13 185 aa13.06□□□□□ -0.32
APTR-201ENST00000398043 EIF4EP06730 217 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 PF4V1P10720 104 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 VDAC1P21796 283 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 SLC6A1P30531 599 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 THBS3P49746 956 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 SSBP2P81877 361 aaPredicted RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 TMEM177Q53S58 311 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 ZNF645Q8N7E2 425 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 FLYWCH2Q96CP2 140 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 TSNAXQ99598 290 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 TPSG1Q9NRR2 321 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 METTL1Q9UBP6 276 aaKnown RBP13.05□□□□□ -0.32
APTR-201ENST00000398043 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
APTR-201ENST00000398043 SRRM4A7MD48 611 aaKnown RBP13.04□□□□□ -0.32
APTR-201ENST00000398043 OR5H8P0DN80 308 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
APTR-201ENST00000398043 LUMP51884 338 aaPredicted RBP13.04□□□□□ -0.32
APTR-201ENST00000398043 TAS2R20P59543 309 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 MRGPRG-AS1Q2M3A8 158 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 OXLD1Q5BKU9 147 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 CXorf66Q5JRM2 361 aaPredicted RBP13.04□□□□□ -0.32
APTR-201ENST00000398043 GPR107Q5VW38 600 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 C8orf86Q6ZUL3 223 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 LINC00482Q8N8I6 264 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 BVESQ8NE79 360 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 ADTRPQ96IZ2 230 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 CMTM3Q96MX0 182 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 P2RX4Q99571 388 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 PARP11Q9NR21 331 aa13.04□□□□□ -0.32
APTR-201ENST00000398043 RBM7Q9Y580 266 aaKnown RBP13.04□□□□□ -0.32
APTR-201ENST00000398043 TRAV41A0A0B4J266 112 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 SLC25A17O43808 307 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 SOX15O60248 233 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 APOA1P02647 267 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 CBX5P45973 191 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 LGALS7P47929 136 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 KLHL30-AS1Q8NEE0 82 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 KLK15Q9H2R5 256 aa13.03□□□□□ -0.32
APTR-201ENST00000398043 RBMX2Q9Y388 322 aaKnown RBP13.03□□□□□ -0.32
APTR-201ENST00000398043 J3QRK9 145 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 ARPC1BO15143 372 aaKnown RBP13.02□□□□□ -0.33
APTR-201ENST00000398043 PF4P02776 101 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 RRASP10301 218 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 NAT1P18440 290 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 RORCP51449 518 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
APTR-201ENST00000398043 TMEM69Q5SWH9 247 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 OVCH2Q7RTZ1 564 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.33
APTR-201ENST00000398043 OR5AP2Q8NGF4 316 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 RAX2Q96IS3 184 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 COMMD3Q9UBI1 195 aa13.02□□□□□ -0.33
APTR-201ENST00000398043 MEIS3P1A6NDR6 274 aa13.01□□□□□ -0.33
APTR-201ENST00000398043 SLC22A5O76082 557 aa13.01□□□□□ -0.33
APTR-201ENST00000398043 CA2P00918 260 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms