RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CSMD1Q96PZ7 3565 aa19.1■□□□□ 0.65
TSPAN4-202ENST00000397396 A0A0B4J2A0 478 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 RBFOX2O43251 390 aaKnown RBP eCLIP19.09■□□□□ 0.652e-6■■■■□ 21.7
TSPAN4-202ENST00000397396 SERPINE2P07093 398 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 UCP1P25874 307 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 MC5RP33032 325 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 SAA4P35542 130 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 RAB13P51153 203 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 RTL8BQ17RB0 113 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 DHRS7BQ6IAN0 325 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 MITD1Q8WV92 249 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 MRPL20Q9BYC9 149 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 TMEM222Q9H0R3 208 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 SHPKQ9UHJ6 478 aa19.09■□□□□ 0.65
TSPAN4-202ENST00000397396 A0A0A6YYJ9 748 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 A0A1W2PRD5 423 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 A0A1W2PRF3 423 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 A0A1W2PRM7 423 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 ATG12O94817 140 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 CT45A6P0DMU7 189 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 CT45A5P0DMU8 189 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 CT45A7P0DMV0 189 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 FOSL1P15407 271 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 SLC9A3R2Q15599 337 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 SPAG16Q8N0X2 631 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 LGI3Q8N145 548 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 OR5AN1Q8NGI8 311 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 OR4S2Q8NH73 311 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 CASTOR1Q8WTX7 329 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 IL22RA2Q969J5 263 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 TP53RKQ96S44 253 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 NABP2Q9BQ15 211 aa19.08■□□□□ 0.65
TSPAN4-202ENST00000397396 ITPR3Q14573 2671 aa19.08■□□□□ 0.64
TSPAN4-202ENST00000397396 A0A0B4J293 547 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 IGHV1-3A0A0C4DH29 117 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 LINC00473A8K010 186 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 REG1BP48304 166 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 RPL30P62888 115 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 TMEM187Q14656 261 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 LIAT1Q6ZQX7 453 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 C12orf45Q8N5I9 185 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 DDB2Q92466 427 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 OR51J1Q9H342 316 aa19.07■□□□□ 0.64
TSPAN4-202ENST00000397396 TEX15Q9BXT5 2789 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 SSNA1O43805 119 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 AVPP01185 164 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 C1orf229Q6ZS94 237 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 LHFPL4Q7Z7J7 247 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 PDPNQ86YL7 162 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 LRTM2Q8N967 370 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 ZNF383Q8NA42 475 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 DRAXINQ8NBI3 349 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 OR52B4Q8NGK2 314 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 GLYATL2Q8WU03 294 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 GPHA2Q96T91 129 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 SLC35D1Q9NTN3 355 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 NUP50Q9UKX7 468 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 WASHC3Q9Y3C0 194 aa19.06■□□□□ 0.64
TSPAN4-202ENST00000397396 DUXBA0A1W2PPF3 345 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 H0YJW9 148 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 FSHBP01225 129 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 IGHV4-38-2P0DP08 117 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 HNF1AP20823 631 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 KLF17Q5JT82 389 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 ZNF695Q8IW36 515 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 TMEM56Q96MV1 263 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 AIFM2Q9BRQ8 373 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 COMMD9Q9P000 198 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 HILPDAQ9Y5L2 63 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 TMEM56-RWDD3S4R434 201 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 MYO9AB2RTY4 2548 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 VPS13CQ709C8 3753 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 ABCA1O95477 2261 aa19.05■□□□□ 0.64
TSPAN4-202ENST00000397396 A0A1W2PPI3 338 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 FCGR3BO75015 233 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 CDS2O95674 445 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 HPRT1P00492 218 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 KRTAP1-1Q07627 177 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 DIAPH2-AS1Q14236 149 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 SSX2Q16385 188 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 SP6Q3SY56 376 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 MOB3BQ86TA1 216 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 PIP4P2Q8N4L2 257 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 RBPMSQ93062 196 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 PLEKHA2Q9HB19 425 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 TMEM160Q9NX00 188 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 FAM96BQ9Y3D0 163 aa19.04■□□□□ 0.64
TSPAN4-202ENST00000397396 A8MV72 311 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 CD99P14209 185 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 CD1BP29016 333 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 BRS3P32247 399 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 LDLRAD2Q5SZI1 272 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 MS4A7Q9GZW8 240 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 MED28Q9H204 178 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 YAE1D1Q9NRH1 226 aa19.03■□□□□ 0.64
TSPAN4-202ENST00000397396 IGHV3OR16-10A0A075B7F0 116 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 H7C2Y5 167 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 FBP1P09467 338 aa19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 HABP2Q14520 560 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-202ENST00000397396 ANKRD55Q3KP44 614 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms