RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 IGLV3-32A0A0A0MS00 114 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 SIAH2O43255 324 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 FRMD6-AS1P0C7T7 363 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 KITLGP21583 273 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 DSCR4P56555 118 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-203ENST00000396547 NXPH1P58417 271 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 HOXA4Q00056 320 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF90Q03938 601 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 LTC4SQ16873 150 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF585BQ52M93 769 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 OR1L1Q8NH94 360 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 GPR35Q9HC97 309 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 OCIAD1Q9NX40 245 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 IL36GQ9NZH8 169 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 MUC6Q6W4X9 2439 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 MDFIC2A0A1B0GVS7 189 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 A0A1W2PPV4 95 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 GGCTO75223 188 aaKnown RBP8.31□□□□□ -1.08
TRIM39-203ENST00000396547 RFPL3SP0C7P2 107 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 SLC25A6P12236 298 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 COX5AP20674 150 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 ARF1P84077 181 aaKnown RBP8.31□□□□□ -1.08
TRIM39-203ENST00000396547 DCAF10Q5QP82 559 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 Q6ZVH6 145 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 Q6ZWC4 215 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 NUFIP2Q7Z417 695 aaKnown RBP8.31□□□□□ -1.08
TRIM39-203ENST00000396547 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 OR10P1Q8NGE3 313 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 IFI44Q8TCB0 444 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 LPAR2Q9HBW0 351 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 GTF3C1Q12789 2109 aa8.31□□□□□ -1.08
TRIM39-203ENST00000396547 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CDX4O14627 284 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 SERF1AO75920 110 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CA6P23280 308 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 GNB1P62873 340 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CCL7P80098 99 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 OR10D3Q8NH80 312 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 WDYHV1Q96HA8 205 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 OR2J1Q9GZK6 312 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 TRAV24A0A0B4J272 114 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 TMEM210A6NLX4 147 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 F6UZH7 168 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 AQP7O14520 342 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CRISP2P16562 243 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 SRP14P37108 136 aaKnown RBP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CDC34P49427 236 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 PDLIM4P50479 330 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 SSR4P51571 173 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 PCBD1P61457 104 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 MMDQ15546 238 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 FOXL2NBQ6ZUU3 175 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 LINC01551Q86U37 167 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CPT1CQ8TCG5 803 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 ARRDC1-AS1Q9H2J1 176 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 TMEM106BQ9NUM4 274 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CER1O95813 267 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 TFF1P04155 84 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 IER3P46695 156 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 CEBPDP49716 269 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 Q6ZSR3 168 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 RPS19BP1Q86WX3 136 aaKnown RBP8.3□□□□□ -1.08
TRIM39-203ENST00000396547 ATOH7Q8N100 152 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 FAM58AQ8N1B3 248 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 OR5A2Q8NGI9 324 aa8.3□□□□□ -1.08
TRIM39-203ENST00000396547 TPPP2P59282 170 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 RAC3P60763 192 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 DRAM1Q8N682 238 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 R3HDM4Q96D70 268 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 AGMATQ9BSE5 352 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 FOXJ2Q9P0K8 574 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 SVILO95425 2214 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 DEFB108AA8MXU0 73 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 FCN1O00602 326 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 MRPL33O75394 65 aaKnown RBP8.29□□□□□ -1.08
TRIM39-203ENST00000396547 IGHV3-13P01766 116 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 IGHV3-7P01780 117 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 PMCHP20382 165 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 FKBP2P26885 142 aaKnown RBP8.29□□□□□ -1.08
TRIM39-203ENST00000396547 BRS3P32247 399 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF573Q86YE8 665 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 PROK2Q9HC23 129 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 PXMP4Q9Y6I8 212 aa8.29□□□□□ -1.08
TRIM39-203ENST00000396547 ASPMQ8IZT6 3477 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 GPR179Q6PRD1 2367 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 IGHV3-43A0A0B4J1X8 118 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 IGHV3-43DP0DP04 118 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 SOX8P57073 446 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 RPL15P61313 204 aaKnown RBP8.28□□□□□ -1.08
TRIM39-203ENST00000396547 MSMO1Q15800 293 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 CEACAM21Q3KPI0 293 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 RFESDQ8TAC1 157 aa8.28□□□□□ -1.08
TRIM39-203ENST00000396547 RNF138Q8WVD3 245 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms