RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZNF66Q6ZN08 573 aa10.08□□□□□ -0.8
ITGB1-202ENST00000396033 TMEM217Q8N7C4 229 aa10.08□□□□□ -0.8
ITGB1-202ENST00000396033 RAB40CQ96S21 281 aa10.08□□□□□ -0.8
ITGB1-202ENST00000396033 MMP26Q9NRE1 261 aa10.08□□□□□ -0.8
ITGB1-202ENST00000396033 FAM212BQ9NTI7 297 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-202ENST00000396033 MMP24Q9Y5R2 645 aa10.08□□□□□ -0.8
ITGB1-202ENST00000396033 KIAA1324LA8MWY0 1029 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-202ENST00000396033 F2RL2O00254 374 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 C1QTNF9P0C862 333 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 G6PCP35575 357 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 GPX4P36969 197 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-202ENST00000396033 PAX9P55771 341 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 TEX36Q5VZQ5 186 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 OR5C1Q8NGR4 320 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 NEUROG1Q92886 237 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 HSD17B10Q99714 261 aaKnown RBP10.07□□□□□ -0.8
ITGB1-202ENST00000396033 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 ADGRG4Q8IZF6 3080 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 ROS1P08922 2347 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 TRGV10A0A0A0MS01 117 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 YPEL1O60688 119 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 KRASP01116 189 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 IGHV3-7P01780 117 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 SEC11BP0C7V7 166 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 IAPPP10997 89 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 PPT1P50897 306 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 DYNLT3P51808 116 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 F2RL1P55085 397 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 BLOC1S1P78537 153 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 AVPI1Q5T686 147 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 ZNF788Q6ZQV5 615 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 YPEL2Q96QA6 119 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 RAB9BQ9NP90 201 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 DYNLRB1Q9NP97 96 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 POLEQ07864 2286 aa10.07□□□□□ -0.8
ITGB1-202ENST00000396033 NKX6-3A6NJ46 265 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 LINC00473A8K010 186 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 SYNGR2O43760 224 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 IFNA4P05014 189 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 SMIM6P0DI80 62 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 UQCC3Q6UW78 93 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 Q6ZRG5 221 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 STX12Q86Y82 276 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 ODF3L1Q8IXM7 274 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 FAM234AQ9H0X4 552 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 NCOR1P1Q9H4R4 102 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 E7EQL1 145 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 FOLR2P14207 255 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 CHRNB4P30926 498 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 LOXL3P58215 753 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 LINC00205P59089 165 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 UQCC1Q9NVA1 299 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 NUDT19A8MXV4 375 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 CLDN14O95500 239 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 BRWD1-AS2P59051 145 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 TMEM267Q0VDI3 215 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-202ENST00000396033 C17orf58Q2M2W7 97 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 IL34Q6ZMJ4 242 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 ZNF295-AS1Q8N0V1 137 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 LINC01560Q8TB33 94 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 KCNJ16Q9NPI9 418 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 WSB1Q9Y6I7 421 aa10.06□□□□□ -0.8
ITGB1-202ENST00000396033 KBTBD11-OT1A0A1B0GTJ5 212 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-202ENST00000396033 TMPRSS2O15393 492 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 CD3EP07766 207 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 AGAP20933 346 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 C9orf152Q5JTZ5 239 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 PARP11Q9NR21 331 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 CLN8Q9UBY8 286 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 USF3Q68DE3 2245 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 SMG1Q96Q15 3661 aaKnown RBP10.05□□□□□ -0.8
ITGB1-202ENST00000396033 ZZEF1O43149 2961 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 TXNL1O43396 289 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 C1orf87Q8N0U7 546 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 RNASE6Q93091 150 aaKnown RBP10.05□□□□□ -0.8
ITGB1-202ENST00000396033 PSENENQ9NZ42 101 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 TRAV38-1A0A0B4J264 116 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 LY86O95711 162 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 CGB3P0DN86 165 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 CGB7P0DN87 165 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 LEAP2Q969E1 77 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 GFOD1Q9NXC2 390 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 ATRXP46100 2492 aa10.05□□□□□ -0.8
ITGB1-202ENST00000396033 M0R1X1 148 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 NDUFB7P17568 137 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 GRNP28799 593 aaKnown RBP10.04□□□□□ -0.8
ITGB1-202ENST00000396033 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
ITGB1-202ENST00000396033 SULT1A1P50225 295 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 TCF23Q7RTU1 214 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 KDF1Q8NAX2 398 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-202ENST00000396033 CCL17Q92583 94 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 ABHD14AQ9BUJ0 271 aa10.04□□□□□ -0.8
ITGB1-202ENST00000396033 IFI27L2Q9H2X8 130 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms