RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 NEU1Q99519 415 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 ACTL6BO94805 426 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 IL15RAQ13261 267 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 SSMEM1Q8WWF3 244 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 RND1Q92730 232 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 HIST1H2BAQ96A08 127 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 SMIM7Q9BQ49 75 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 H0Y980 276 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 UCP1P25874 307 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 WDR25Q64LD2 544 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-205ENST00000395757 OR10P1Q8NGE3 313 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 SNIP1Q8TAD8 396 aaKnown RBP12.16□□□□□ -0.46
SREBF1-205ENST00000395757 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
SREBF1-205ENST00000395757 REG1BP48304 166 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 ERVK-16P61578 105 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-205ENST00000395757 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 SPSB4Q96A44 273 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 GCM1Q9NP62 436 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 RPL30P62888 115 aaKnown RBP12.15□□□□□ -0.46
SREBF1-205ENST00000395757 FAM27E3Q08E93 113 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 RPL39P5Q59GN2 51 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 PCSK4Q6UW60 755 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 FRZBQ92765 325 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 OR2V2Q96R30 315 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 ASCL3Q9NQ33 180 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 IL36GQ9NZH8 169 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 MALRD1Q5VYJ5 2156 aa12.15□□□□□ -0.46
SREBF1-205ENST00000395757 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-205ENST00000395757 AQP7O14520 342 aa12.15□□□□□ -0.47
SREBF1-205ENST00000395757 CIDEAO60543 219 aa12.15□□□□□ -0.47
SREBF1-205ENST00000395757 IGHV3-48P01763 117 aa12.15□□□□□ -0.47
SREBF1-205ENST00000395757 COLCA1Q6ZS62 124 aa12.15□□□□□ -0.47
SREBF1-205ENST00000395757 FAM122AQ96E09 287 aa12.15□□□□□ -0.47
SREBF1-205ENST00000395757 CACNA1AO00555 2505 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 DDTP30046 118 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 UCP3P55916 312 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
SREBF1-205ENST00000395757 MDS2Q8NDY4 140 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
SREBF1-205ENST00000395757 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
SREBF1-205ENST00000395757 TCF21O43680 179 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 PITX3O75364 302 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 CD200P41217 278 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 IL24Q13007 206 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 BATFQ16520 125 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-205ENST00000395757 CDPF1Q6NVV7 123 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 RAB40CQ96S21 281 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 TOLLIPQ9H0E2 274 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 A0A1W2PPQ1 181 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 J3QW42 95 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 RAB5AP20339 215 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 GINS3Q9BRX5 216 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 RBKSQ9H477 322 aa12.14□□□□□ -0.47
SREBF1-205ENST00000395757 MLNRO43193 412 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 IGKV1-5P01602 117 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 PRDX2P32119 198 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 RAB5CP51148 216 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 GABRA6Q16445 453 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 H1FOOQ8IZA3 346 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 OR5D13Q8NGL4 314 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 GATAD1Q8WUU5 269 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CARHSP1Q9Y2V2 147 aaKnown RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 HBE1P02100 147 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 DHRS7BQ6IAN0 325 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 BHLHA15Q7RTS1 189 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
SREBF1-205ENST00000395757 RNF212BA8MTL3 300 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 SLC25A6P12236 298 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 IRF2P14316 349 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CHRNA7P36544 502 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 TAS2R30P59541 319 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CCL17Q92583 94 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 CCL13Q99616 98 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 PARD6AQ9NPB6 346 aa12.13□□□□□ -0.47
SREBF1-205ENST00000395757 TRAV38-1A0A0B4J264 116 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 ASCL4Q6XD76 172 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 VPS25Q9BRG1 176 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 PHOX2AO14813 284 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 ZNF737O75373 536 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 CLDN14O95500 239 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 CD5P06127 495 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 KIR2DL2P43627 348 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-205ENST00000395757 GCSAMLQ5JQS6 135 aa12.12□□□□□ -0.47
SREBF1-205ENST00000395757 Q6ZT83 130 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms