RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ELK1P19419 428 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 AADACP22760 399 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 ARPC4P59998 168 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 PITPNAQ00169 270 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 CFHR3Q02985 330 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 SPCS2Q15005 226 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 PLGLAQ15195 96 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 PSG5Q15238 335 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 ECSCRQ19T08 205 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 C5orf64Q2M2E5 130 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 CNIH2Q6PI25 160 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 C8orf86Q6ZUL3 223 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 HOGA1Q86XE5 327 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 CLVS1Q8IUQ0 354 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 BVESQ8NE79 360 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 BEST4Q8NFU0 473 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 NPBQ8NG41 125 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 CHPT1Q8WUD6 406 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 S100A16Q96FQ6 103 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 DUX3Q96PT4 197 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 FAM103A1Q9BTL3 118 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR51J1Q9H342 316 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 KIAA1456Q9P272 454 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 METTL1Q9UBP6 276 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 MRPS7Q9Y2R9 242 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 TSSC4Q9Y5U2 329 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 A0A0A6YYH2 397 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 A6NJ64 397 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 NUDT19A8MXV4 375 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 TNFSF12O43508 249 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 SLC25A17O43808 307 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 TUSC2O75896 110 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 DIRAS3O95661 229 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 CA2P00918 260 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OPN1MWP04001 364 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OPN1MW2P0DN77 364 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OPN1MW3P0DN78 364 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 VDAC1P21796 283 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 FCGR2CP31995 323 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 MC5RP33032 325 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 DUTP33316 252 aaKnown RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 RORCP51449 518 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 LUMP51884 338 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 RPS16P62249 146 aaKnown RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 RPL23AP62750 156 aaKnown RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 RPL30P62888 115 aaKnown RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 SLC35B1P78383 322 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 DEFA6Q01524 100 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 PJVKQ0ZLH3 352 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 DEFB136Q30KP8 78 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 LIN54Q6MZP7 749 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 ETV3LQ6ZN32 361 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 PDPNQ86YL7 162 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 SNX29P2Q8IUI4 249 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 ZNF645Q8N7E2 425 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 KLHL30-AS1Q8NEE0 82 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR4F17Q8NGA8 305 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 ABHD5Q8WTS1 349 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 SECTM1Q8WVN6 248 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR4F4Q96R69 305 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 KLK15Q9H2R5 256 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 GHITMQ9H3K2 345 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 ZFAND3Q9H8U3 227 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 IFT46Q9NQC8 304 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR2W1Q9Y3N9 320 aa6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 PRKDCP78527 4128 aaKnown RBP6.01□□□□□ -1.45
HMGB3P1-201ENST00000393368 TRAV41A0A0B4J266 112 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 SRRM4A7MD48 611 aaKnown RBP6□□□□□ -1.45
HMGB3P1-201ENST00000393368 FAM25AB3EWG3 89 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 FAM25CB3EWG5 89 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 FAM25GB3EWG6 89 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 ARPC1BO15143 372 aaKnown RBP6□□□□□ -1.45
HMGB3P1-201ENST00000393368 SHOXO15266 292 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 WIPF1O43516 503 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 SOX15O60248 233 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 FCGR3BO75015 233 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 TMEM127O75204 238 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 CRYZL1O95825 349 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 IGLV2-23P01705 113 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 HLA-DQB1P01920 261 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 PMP2P02689 132 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 PF4P02776 101 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 PRB2P02812 416 aaPredicted RBP6□□□□□ -1.45
HMGB3P1-201ENST00000393368 IGF1P05019 195 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 CTXN2P0C2S0 81 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 APELAP0DMC3 54 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR5H8P0DN80 308 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 RFX2P48378 723 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 THBS3P49746 956 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 FXYD4P59646 89 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 GNB1P62873 340 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 CX3CL1P78423 397 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 SSBP2P81877 361 aaPredicted RBP6□□□□□ -1.45
HMGB3P1-201ENST00000393368 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
HMGB3P1-201ENST00000393368 OXLD1Q5BKU9 147 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 TEX38Q6PEX7 206 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 IDO2Q6ZQW0 420 aa6□□□□□ -1.45
HMGB3P1-201ENST00000393368 TMEM17Q86X19 198 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms