RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 RPL39P5Q59GN2 51 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 IDO2Q6ZQW0 420 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 SIGLECL1Q8N7X8 197 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 OR2T10Q8NGZ9 312 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 OSR1Q8TAX0 266 aaPredicted RBP10.63□□□□□ -0.71
USP44-202ENST00000393091 IL22RA2Q969J5 263 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 C5orf66Q9H5L9 145 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 PITPNC1Q9UKF7 332 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 H0Y980 276 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 TIMM23O14925 209 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 FAM106CPP0CH98 169 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
USP44-202ENST00000393091 TSPAN5P62079 268 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 C16orf95Q9H693 158 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 A0A1W2PPE3 182 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 LINC00473A8K010 186 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 NDUFA7O95182 113 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 MOSP00540 346 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 LGALS7P47929 136 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 RNASE12Q5GAN4 147 aaKnown RBP10.62□□□□□ -0.71
USP44-202ENST00000393091 SLC25A42Q86VD7 318 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 CCDC71LQ8N9Z2 235 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 ZNF418Q8TF45 676 aaPredicted RBP10.62□□□□□ -0.71
USP44-202ENST00000393091 VSIG4Q9Y279 399 aa10.62□□□□□ -0.71
USP44-202ENST00000393091 IGLV2-23P01705 113 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 TAS2R31P59538 309 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 MZT2BQ6NZ67 158 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 TMEM230Q96A57 120 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 SSX3Q99909 188 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 AIFM2Q9BRQ8 373 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 PLEKHA2Q9HB19 425 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 SLC2A9Q9NRM0 540 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 F2RP25116 425 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 CATR1Q13166 79 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 IL17RELQ6ZVW7 336 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 LIN7CQ9NUP9 197 aaKnown RBP10.61□□□□□ -0.71
USP44-202ENST00000393091 SOX21Q9Y651 276 aaPredicted RBP10.61□□□□□ -0.71
USP44-202ENST00000393091 J3QRK9 145 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 MPPED1O15442 326 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 PTTG1O95997 202 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 P0C879 139 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 S100GP29377 79 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 RPL30P62888 115 aaKnown RBP10.61□□□□□ -0.71
USP44-202ENST00000393091 SSX2Q16385 188 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 KLK9Q2XQG4 91 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
USP44-202ENST00000393091 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
USP44-202ENST00000393091 ESM1Q9NQ30 184 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 KLK9Q9UKQ9 250 aa10.61□□□□□ -0.71
USP44-202ENST00000393091 MXRA5Q9NR99 2828 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 DNAJC9-AS1A6NH13 148 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 UCP1P25874 307 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 CCBE1Q6UXH8 406 aaPredicted RBP10.6□□□□□ -0.71
USP44-202ENST00000393091 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 TMEM56Q96MV1 263 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 NUBP2Q9Y5Y2 271 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 TMEM56-RWDD3S4R434 201 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 A0A0B4J2A0 478 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 DUXBA0A1W2PPF3 345 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 M0R1X1 148 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 APOA2P02652 100 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
USP44-202ENST00000393091 MARCH1Q8TCQ1 289 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 EAF1Q96JC9 268 aaPredicted RBP10.6□□□□□ -0.71
USP44-202ENST00000393091 SHPKQ9UHJ6 478 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 PRELID3BQ9Y3B1 194 aa10.6□□□□□ -0.71
USP44-202ENST00000393091 TCF21O43680 179 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 INPP1P49441 399 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
USP44-202ENST00000393091 RTL8BQ17RB0 113 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 ZNF585BQ52M93 769 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 LURAP1LQ8IV03 231 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 TEX45Q8NA69 505 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 OR4S2Q8NH73 311 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 MMP24Q9Y5R2 645 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 HPRT1P00492 218 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 IFNA2P01563 188 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
USP44-202ENST00000393091 DEFA1P59665 94 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 DEFA3P59666 94 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 BAMBIQ13145 260 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 TMEM128Q5BJH2 165 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 FAAP20Q6NZ36 180 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 NAA60Q9H7X0 242 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 HILPDAQ9Y5L2 63 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 TSPAN9O75954 239 aa10.59□□□□□ -0.71
USP44-202ENST00000393091 IGHV3-7P01780 117 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms