RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 METTL15P1P0C7V9 234 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 NTF3P20783 257 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 C1orf100Q5SVJ3 147 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 TEX261Q6UWH6 196 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 GLT6D1Q7Z4J2 308 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 PPP1R27Q86WC6 154 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 RBFOX1Q9NWB1 397 aaKnown RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 TXNL4BQ9NX01 149 aaKnown RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 U3KQ87 197 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 KALRNO60229 2985 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 RIIAD1A6NNX1 92 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 CYB5BO43169 146 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 GADD45GO95257 159 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 CDS2O95674 445 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 PPIBP23284 216 aaKnown RBP2.85□□□□□ -1.95
XRN1-202ENST00000392981 CFPP27918 469 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 S100A11P31949 105 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SLC25A1P53007 311 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 HIST1H3AP68431 136 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
XRN1-202ENST00000392981 ADIRFQ15847 76 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 LAMTOR1Q6IAA8 161 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SLC36A1Q7Z2H8 476 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 OR2T27Q8NH04 317 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 ZNRF2Q8NHG8 242 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 SLC35G5Q96KT7 338 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 VPREB3Q9UKI3 123 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 TP53TG1Q9Y2A0 90 aa2.85□□□□□ -1.95
XRN1-202ENST00000392981 K7EP13 123 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 CT45A10P0DMU9 189 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 LAMP1P11279 417 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 TNFRSF1BP20333 461 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 GABRA2P47869 451 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 OR2F1Q13607 317 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 STEAP4Q687X5 459 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ZNF343Q6P1L6 599 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ZNF584Q8IVC4 421 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 RIMKLAQ8IXN7 391 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 C9orf40Q8IXQ3 194 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 SUMF2Q8NBJ7 301 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 OR4K15Q8NH41 348 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NTN5Q8WTR8 489 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 RBMXL1Q96E39 390 aaKnown RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 LINC00052Q96N35 136 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 OR2V2Q96R30 315 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 GINS3Q9BRX5 216 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 TECPR2O15040 1411 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ABCC6O95255 1503 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 MYH7BA7E2Y1 1941 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 IGLV7-46A0A075B6I9 117 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 A0A0D9SG52 128 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 PMS2P5A8MQ11 134 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 C1QBP02746 253 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 RRAS2P62070 204 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 HLA-DRB3P79483 266 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ZNF239Q16600 458 aaKnown RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 ZNF630Q2M218 657 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 ACOT6Q3I5F7 207 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 SLC25A30Q5SVS4 291 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 TBPL2Q6SJ96 375 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 TMEM25Q86YD3 366 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ABHD3Q8WU67 409 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NMNAT3Q96T66 252 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 HEXA-AS1Q9H8Q6 139 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 TPT1P8Q9HAU6 139 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 DHRS4-AS1Q9P1J3 65 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 DKK2Q9UBU2 259 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NFAT5O94916 1531 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 A2ML1A8K2U0 1454 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 CPSF4LA6NMK7 179 aaKnown RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 GGCTO75223 188 aaKnown RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 CRYBA1P05813 215 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 ZNF823P16415 610 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 IGHV1-2P23083 117 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 MDH2P40926 338 aaKnown RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 LHX2P50458 406 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NDUFA6P56556 154 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 LINC01547P58512 204 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 TAS2R30P59541 319 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 RAP1AP62834 184 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 KLF9Q13886 244 aaPredicted RBP2.84□□□□□ -1.95
XRN1-202ENST00000392981 TAF9Q16594 264 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NHLRC3Q5JS37 347 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 BORCS8Q96FH0 119 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 BMFQ96LC9 184 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 OR8D2Q9GZM6 311 aa2.84□□□□□ -1.95
XRN1-202ENST00000392981 NSD3Q9BZ95 1437 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 MYH3P11055 1940 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 ASTN1O14525 1302 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 PHOX2AO14813 284 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 CST2P09228 141 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 FAM236CP0DP71 79 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 GABRR1P24046 479 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 CD70P32970 193 aa2.84□□□□□ -1.96
XRN1-202ENST00000392981 THBS3P49746 956 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms