RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 CTXN2P0C2S0 81 aa12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 FKBP2P26885 142 aaKnown RBP12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 CNN1P51911 297 aaKnown RBP12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 GCM1Q9NP62 436 aa12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 TCFL5Q9UL49 500 aa12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
LRRFIP1-204ENST00000392000 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 SYNGR4O95473 234 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 OR2H2O95918 312 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 HRASP01112 189 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 KRTDAPP60985 99 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 ZNF324BQ6AW86 544 aaPredicted RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 ACTR3CQ9C0K3 210 aaPredicted RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 TRBV24-1A0A075B6N3 115 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 RPL30P62888 115 aaKnown RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 H2BFWTQ7Z2G1 175 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 ZNF114Q8NC26 417 aa12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 SMG1Q96Q15 3661 aaKnown RBP12.28□□□□□ -0.44
LRRFIP1-204ENST00000392000 COX5AP20674 150 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 IL3RAP26951 378 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 ZNF90Q03938 601 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 IL11RAQ14626 422 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 IQCJQ1A5X6 159 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 APH1AQ96BI3 265 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 NEIL1Q96FI4 390 aaPredicted RBP12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 PSG11Q9UQ72 335 aa12.27□□□□□ -0.44
LRRFIP1-204ENST00000392000 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 MT-CO3P00414 261 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 MAS1LP35410 378 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 CDC34P49427 236 aaPredicted RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 PPP1CBP62140 327 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 GNG3P63215 75 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 PDLIM3Q53GG5 364 aaPredicted RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR5A2Q8NGI9 324 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR2J1Q9GZK6 312 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 HEYLQ9NQ87 328 aaPredicted RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 CELA3BP08861 270 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 KITLGP21583 273 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 CT55Q8WUE5 264 aa12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 SF3B5Q9BWJ5 86 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.45
LRRFIP1-204ENST00000392000 MDFIC2A0A1B0GVS7 189 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 ODAMA1E959 279 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 TNFRSF9Q07011 255 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 HES3Q5TGS1 186 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 ZNF573Q86YE8 665 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 WDR54Q9H977 334 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 SERTAD4Q9NUC0 356 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 MBP02144 154 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 RND2P52198 227 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 ATP1A1-AS1Q5TC04 95 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 ATOH7Q8N100 152 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 PINX1Q96BK5 328 aaKnown RBP12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 BTF3L4Q96K17 158 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 PILRBQ9UKJ0 227 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 IL18BPO95998 194 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 NTF3P20783 257 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 SSTR5P35346 364 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 FABP6P51161 128 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
LRRFIP1-204ENST00000392000 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 M0R143 59 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 TGOLN2O43493 480 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 PMCHP20382 165 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 ARG2P78540 354 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 SERF2P84101 59 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 WDYHV1Q96HA8 205 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 FCGR3BO75015 233 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 LYZL6O75951 148 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 IER3P46695 156 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 LEAP2Q969E1 77 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 C1QTNF5Q9BXJ0 243 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 CDH20Q9HBT6 801 aa12.25□□□□□ -0.45
LRRFIP1-204ENST00000392000 NPPCP23582 126 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 ABHD17BQ5VST6 288 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR8G5Q8NG78 346 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms