RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 DNMT1P26358 1616 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 RLFQ13129 1914 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 PHF3Q92576 2039 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 IGLV9-49A0A0B4J1Y8 123 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TRAV8-6A0A0B4J262 113 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 IGHV4-28A0A0C4DH34 117 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 MEIS3P1A6NDR6 274 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 COLCA2A8K830 154 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 KLLNB2CW77 178 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 FNDC10F2Z333 226 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 NDUFS5O43920 106 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 EDF1O60869 148 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 FAM20BO75063 409 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SCRG1O75711 98 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TNFP01375 233 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 IGHV3-9P01782 118 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 EIF4EP06730 217 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 HKR1P10072 659 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LAMP1P11279 417 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 DRD3P35462 400 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 GUCA1AP43080 201 aaPredicted RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TAS2R46P59540 309 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 DEFA1P59665 94 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 CACNG7P62955 275 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 EIF5AP63241 154 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 MYL5Q02045 173 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 PEA15Q15121 130 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 CENPWQ5EE01 88 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 MEIG1Q5JSS6 88 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 C10orf91Q5T1B1 145 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 C11orf71Q6IPW1 123 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 EIF5AL1Q6IS14 154 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 CNIH2Q6PI25 160 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 Q6Q795 121 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SBSNQ6UWP8 590 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 GFRALQ6UXV0 394 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LINC00114Q6XXX2 140 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 Q6ZN92 141 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ZNF493Q6ZR52 646 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ZNF720Q7Z2F6 126 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ZNF571Q7Z3V5 609 aaPredicted RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LRRTM1Q86UE6 522 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LRP11Q86VZ4 500 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TTC9CQ8N5M4 171 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SUMF2Q8NBJ7 301 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 C11orf72Q8NBR9 251 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 NEXN-AS1Q8NBZ9 246 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ZNRF1Q8ND25 227 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 OR2M3Q8NG83 312 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 OR4C16Q8NGL9 310 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 OR52P1PQ8NH57 321 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LMX1AQ8TE12 382 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 MZB1Q8WU39 189 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 KLK6Q92876 244 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 MAGOHBQ96A72 148 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 RITA1Q96K30 269 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 HYLS1Q96M11 299 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 IGF2BP2-AS1Q96M15 143 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 LINC01587Q99440 93 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SSBP3Q9BWW4 388 aaPredicted RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SRXN1Q9BYN0 137 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SLIRPQ9GZT3 109 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TMEM191AQ9H0A3 160 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 RERGLQ9H628 205 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TUBA4BQ9H853 241 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 TMEM45AQ9NWC5 275 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 NTMQ9P121 344 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 ZNF629Q9UEG4 869 aaPredicted RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 SLC2A6Q9UGQ3 507 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 RPUSD1Q9UJJ7 312 aaKnown RBP2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 PXMP4Q9Y6I8 212 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 GLI3P10071 1580 aa2.68□□□□□ -1.98
TRAJ17-201ENST00000390520 NUP210Q8TEM1 1887 aaPredicted RBP2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 CDK5RAP2Q96SN8 1893 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 ERVK-7P63135 1459 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 A0A0B4J2A0 478 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 TRBV5-4A0A0C4DH59 114 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 A0A1W2PRS3 328 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 C7orf71A4D174 169 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 IZUMO1RA6ND01 250 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 PGPA6NDG6 321 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 LINC00473A8K010 186 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 CCDC179H3BU77 68 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 J3QRK9 145 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 UPK2O00526 184 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 PIRO00625 290 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 PDCD5O14737 125 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 FFAR1O14842 300 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 SS18L1O75177 396 aaPredicted RBP2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 TNFSF13O75888 250 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 JTBO76095 146 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 NGFP01138 241 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 APOC3P02656 99 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 GZMBP10144 247 aa2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 PPIBP23284 216 aaKnown RBP2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 FKBP2P26885 142 aaKnown RBP2.67□□□□□ -1.98
TRAJ17-201ENST00000390520 PSMB8P28062 276 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms