RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CSN3P07498 182 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 CFPP27918 469 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 ROS1P08922 2347 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 SERTM2A0A1B0GWG4 89 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 HPRT1P00492 218 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 HBZP02008 142 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 CD82P27701 267 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 WNT5AP41221 380 aa11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-201ENST00000389328 CYC1P08574 325 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 ARL14EPLP0DKL9 152 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 BPIFB3P59826 476 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 FXYD3Q14802 87 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 ZNF826PQ6ZT77 177 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 TRGV5A0A0B4J1U4 118 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 LSM10Q969L4 123 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
TRAPPC9-201ENST00000389328 GNB1P62873 340 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 TEPPQ6URK8 271 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 MDP1Q86V88 176 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 LRTM2Q8N967 370 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 SLC25A40Q8TBP6 338 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 TMEM167BQ9NRX6 74 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 ANAPC1Q9H1A4 1944 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 C1QTNF9BB2RNN3 333 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 CD55P08174 381 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 NPY1RP25929 384 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 MFAP2P55001 183 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 TFF3Q07654 80 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 LINC00596Q86U02 117 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZBTB34Q8NCN2 500 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR5R1Q8NH85 324 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 SFRP2Q96HF1 295 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 TECRQ9NZ01 308 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 TCFL5Q9UL49 500 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 CLDN16Q9Y5I7 305 aa11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 CHCHD2Q9Y6H1 151 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC9-201ENST00000389328 PMS2P1A4D2B8 440 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 HGFACQ04756 655 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 A0A1W2PR77 199 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 SLC17A3O00476 420 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 APCSP02743 223 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 OPRK1P41145 380 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 M0R1B8 84 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 ATP5G3P48201 142 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 MEOX1P50221 254 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 NUBP1P53384 320 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR6C3Q9NZP0 311 aa11.2□□□□□ -0.62
TRAPPC9-201ENST00000389328 IGKV1-27A0A075B6S5 117 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 DEFA4P12838 97 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 ZNF441Q8N8Z8 693 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR4S2Q8NH73 311 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 TGIF2LYQ8IUE0 185 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 SMRP1Q8NCR6 262 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 FAM131CQ96AQ9 280 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 DYNLRB1Q9NP97 96 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 WIPI2Q9Y4P8 454 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 IGHV1-45A0A0A0MS14 117 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 E9PLN8 166 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 RHBDL1O75783 438 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 RIPPLY2Q5TAB7 128 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 NFAM1Q8NET5 270 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 GDF9O60383 454 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 ORM2P19652 201 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 FOXJ2Q9P0K8 574 aa11.19□□□□□ -0.62
TRAPPC9-201ENST00000389328 A0A1W2PQM1 296 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 AGFG2O95081 481 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 CD99P14209 185 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 TMEM11P17152 192 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 WDFY1Q8IWB7 410 aa11.18□□□□□ -0.62
TRAPPC9-201ENST00000389328 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms