RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 PMS2P5A8MQ11 134 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 B4DEV8 164 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 TFF1P04155 84 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 GZMHP20718 246 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 DLK1P80370 383 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 C3orf36Q3SXR2 165 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 WASF3Q9UPY6 502 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 RNF224P0DH78 156 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 TMEM147Q9BVK8 224 aa12.47□□□□□ -0.41
SCFD2-201ENST00000388940 METTL1Q9UBP6 276 aaKnown RBP12.47□□□□□ -0.41
SCFD2-201ENST00000388940 LINC00473A8K010 186 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 LCN15Q6UWW0 184 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 BTNL3Q6UXE8 466 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 SSX7Q7RTT5 188 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 H2BFWTQ7Z2G1 175 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 TPRX1Q8N7U7 411 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 OR2Z1Q8NG97 314 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 PPP1R35Q8TAP8 253 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 SNX22Q96L94 193 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 PFDN5Q99471 154 aa12.46□□□□□ -0.41
SCFD2-201ENST00000388940 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 UBE2L5PA0A1B0GUS4 154 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 IGHV3-13P01766 116 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 EGR1P18146 543 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 CEBPGP53567 150 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 TIMM23BQ5SRD1 257 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 ADAM5Q6NVV9 412 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 DTD1Q8TEA8 209 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 ZNF665Q9H7R5 613 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 VAX2Q9UIW0 290 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 JPT1Q9UK76 154 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 PSG11Q9UQ72 335 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 OTOGLQ3ZCN5 2332 aa12.46□□□□□ -0.42
SCFD2-201ENST00000388940 MGST3O14880 152 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 LY86O95711 162 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 IFNA1P01562 189 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 IFNA17P01571 189 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 IGHV2-5P01817 119 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 NUBP1P53384 320 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 SPCS3P61009 180 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 RAB4BP61018 213 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
SCFD2-201ENST00000388940 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 VWC2Q2TAL6 325 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 AARDQ4LEZ3 155 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 RFESDQ8TAC1 157 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 CLN8Q9UBY8 286 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 DIDO1Q9BTC0 2240 aaKnown RBP12.45□□□□□ -0.42
SCFD2-201ENST00000388940 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 MAP1LC3B2A6NCE7 125 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 ZFP92A6NM28 416 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 YPEL1O60688 119 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 ZG16O60844 167 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 MBP02144 154 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 GNB2P62879 340 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 MAP1LC3BQ9GZQ8 125 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
SCFD2-201ENST00000388940 A0A1W2PPE3 182 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 DUTP33316 252 aaKnown RBP12.44□□□□□ -0.42
SCFD2-201ENST00000388940 GLRXP35754 106 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 TAS2R60P59551 318 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 MORN2Q502X0 79 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 SSX9Q7RTT3 188 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 SLC39A9Q9NUM3 307 aa12.44□□□□□ -0.42
SCFD2-201ENST00000388940 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 CD55P08174 381 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 FGF8P55075 233 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 RAB11AP62491 216 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 ELOBQ15370 118 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 LRP11Q86VZ4 500 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
SCFD2-201ENST00000388940 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 CACNA1HO95180 2353 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 MARCH11A6NNE9 402 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 F2RL2O00254 374 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 SLC31A2O15432 143 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 PROP1O75360 226 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 HPRT1P00492 218 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 LHBP01229 141 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
SCFD2-201ENST00000388940 GPR12P47775 334 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms