RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 H0YJW9 148 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 FCN1O00602 326 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 UBBP0CG47 229 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
VCX3A-201ENST00000381089 CALRP27797 417 aaKnown RBP12.26□□□□□ -0.45
VCX3A-201ENST00000381089 YIPF6Q96EC8 236 aa12.26□□□□□ -0.45
VCX3A-201ENST00000381089 TSNAXQ99598 290 aaKnown RBP12.26□□□□□ -0.45
VCX3A-201ENST00000381089 H3BUA1 57 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 ARL6IP5O75915 188 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 SPDEFO95238 335 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 CA2P00918 260 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 HAGHQ16775 308 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 TATDN3Q17R31 274 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 RPL39P5Q59GN2 51 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
VCX3A-201ENST00000381089 MOB1BQ7L9L4 216 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 OR13F1Q8NGS4 319 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 SSR3Q9UNL2 185 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 GAB2Q9UQC2 676 aa12.25□□□□□ -0.45
VCX3A-201ENST00000381089 ITGB1BP1O14713 200 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 ALDH3B2P48448 385 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 LSM3P62310 102 aaKnown RBP12.24□□□□□ -0.45
VCX3A-201ENST00000381089 PSG5Q15238 335 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 LCN12Q6JVE5 192 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 GPR141Q7Z602 305 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 C5orf24Q7Z6I8 188 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 LRRTM1Q86UE6 522 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 POC5Q8NA72 575 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 OR9G4Q8NGQ1 327 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
VCX3A-201ENST00000381089 TXNL4BQ9NX01 149 aaKnown RBP12.24□□□□□ -0.45
VCX3A-201ENST00000381089 SMIM30A4D0T7 59 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 AIREO43918 545 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 CNIH1O95406 144 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 SRMP19623 302 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 MYL9P24844 172 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 RPS16P62249 146 aaKnown RBP12.23□□□□□ -0.45
VCX3A-201ENST00000381089 FXYD3Q14802 87 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 Q8N402 240 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 PHYHIPQ92561 330 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 ABHD14BQ96IU4 210 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 FAAP24Q9BTP7 215 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 CENPOQ9BU64 300 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 FUNDC2Q9BWH2 189 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
VCX3A-201ENST00000381089 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 AK6Q9Y3D8 172 aaKnown RBP12.23□□□□□ -0.45
VCX3A-201ENST00000381089 TNCP24821 2201 aa12.23□□□□□ -0.45
VCX3A-201ENST00000381089 SHISA3A0PJX4 238 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 ANKRD34BA5PLL1 514 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 APOA2P02652 100 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 AADACP22760 399 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 ZBTB25P24278 435 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 TGFBR1P36897 503 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 KLF5Q13887 457 aaPredicted RBP12.22□□□□□ -0.45
VCX3A-201ENST00000381089 TIMM50Q3ZCQ8 353 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 GPR107Q5VW38 600 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 PDPNQ86YL7 162 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 NAA50Q9GZZ1 169 aaKnown RBP12.22□□□□□ -0.45
VCX3A-201ENST00000381089 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
VCX3A-201ENST00000381089 NAPSAO96009 420 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 GALP22466 123 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 FGF9P31371 208 aaPredicted RBP12.21□□□□□ -0.45
VCX3A-201ENST00000381089 CEACAM6P40199 344 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
VCX3A-201ENST00000381089 LGALS7P47929 136 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 OR10A3P58181 314 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 RPS27AP62979 156 aaKnown RBP12.21□□□□□ -0.45
VCX3A-201ENST00000381089 GLT8D1Q68CQ7 371 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 OR5T1Q8NG75 326 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 KCNG3Q8TAE7 436 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 GFI1Q99684 422 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 PLEKHJ1Q9NW61 149 aa12.21□□□□□ -0.45
VCX3A-201ENST00000381089 HYDINQ4G0P3 5121 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 SLC25A17O43808 307 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 NCS1P62166 190 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 MXD1Q05195 221 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 ZNF880Q6PDB4 577 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 CLVS1Q8IUQ0 354 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-201ENST00000381089 DRAXINQ8NBI3 349 aaPredicted RBP12.2□□□□□ -0.46
VCX3A-201ENST00000381089 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 SIGLEC8Q9NYZ4 499 aa12.2□□□□□ -0.46
VCX3A-201ENST00000381089 PEF1Q9UBV8 284 aaKnown RBP12.2□□□□□ -0.46
VCX3A-201ENST00000381089 A0A0B4J203 849 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 TRAV1-2A0A0B4J238 106 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 PDCD5O14737 125 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms