RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PHB2Q99623 299 aa12.89□□□□□ -0.35
HMGN1-203ENST00000380748 C11orf54Q9H0W9 315 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-203ENST00000380748 AMBNQ9NP70 447 aa12.89□□□□□ -0.35
HMGN1-203ENST00000380748 OR1A1Q9P1Q5 309 aa12.89□□□□□ -0.35
HMGN1-203ENST00000380748 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
HMGN1-203ENST00000380748 APOA2P02652 100 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 OR9G9P0C7N8 305 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 ZNF45Q02386 682 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 ZNF57Q68EA5 555 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-203ENST00000380748 RPL22L1Q6P5R6 122 aaKnown RBP12.88□□□□□ -0.35
HMGN1-203ENST00000380748 SVOPQ8N4V2 548 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 THRSPQ92748 146 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 KRTAP4-5Q9BYR2 181 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 MLXQ9UH92 298 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
HMGN1-203ENST00000380748 A0A1B0GVY2 172 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 SAC3D1A6NKF1 404 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 FAM223BA6NKX1 122 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 GYG2O15488 501 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 TUSC2O75896 110 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 LIMS3P0CW19 117 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 LIMS4P0CW20 117 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 CBLN1P23435 193 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 FAM223AQ8IWN6 122 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 TMEM217Q8N7C4 229 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 FAAP24Q9BTP7 215 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
HMGN1-203ENST00000380748 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 OR2C1O95371 312 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 GABRB1P18505 474 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 CAPGP40121 348 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 APOC4P55056 127 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 DNAL1Q4LDG9 190 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 CCDC58Q4VC31 144 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 RNF183Q96D59 192 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
HMGN1-203ENST00000380748 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 LGALS9O00182 355 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 CEACAM6P40199 344 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 ZIK1Q3SY52 487 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-203ENST00000380748 ZNF880Q6PDB4 577 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 SMIM19Q96E16 107 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 HARBI1Q96MB7 349 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-203ENST00000380748 ZNF221Q9UK13 617 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
HMGN1-203ENST00000380748 PKD1P98161 4303 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 M0R1X1 148 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 MPPED1O15442 326 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
HMGN1-203ENST00000380748 NAPSAO96009 420 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 OR2G6Q5TZ20 316 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
HMGN1-203ENST00000380748 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
HMGN1-203ENST00000380748 FCGR1AP12314 374 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 CTRB1P17538 263 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
HMGN1-203ENST00000380748 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
HMGN1-203ENST00000380748 TNXAQ16473 311 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 BTNL8Q6UX41 500 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 FBLIM1Q8WUP2 373 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 SRSF12Q8WXF0 261 aaKnown RBP12.83□□□□□ -0.36
HMGN1-203ENST00000380748 FBXL17Q9UF56 701 aa12.83□□□□□ -0.36
HMGN1-203ENST00000380748 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 UBE2CO00762 179 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 OGG1O15527 345 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 OR2J3O76001 311 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 LALBAP00709 142 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 ALPLP05186 524 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 ZBTB25P24278 435 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 ETV1P50549 477 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 Q499Y3 187 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 MOB1BQ7L9L4 216 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 NECAP1Q8NC96 275 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 PTX4Q96A99 478 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 SLC7A6OSQ96CW6 309 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-203ENST00000380748 CENPNQ96H22 339 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-203ENST00000380748 UBQLN2Q9UHD9 624 aa12.82□□□□□ -0.36
HMGN1-203ENST00000380748 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
HMGN1-203ENST00000380748 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 SHOXO15266 292 aa12.81□□□□□ -0.36
HMGN1-203ENST00000380748 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms