RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 FAM27E3Q08E93 113 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 EIF4EBP1Q13541 118 aaPredicted RBP10.54□□□□□ -0.72
VPS16-202ENST00000380445 SLC25A24Q6NUK1 477 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 UNQ6494/PRO21346Q6UXR6 183 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 SSX8Q7RTT4 187 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
VPS16-202ENST00000380445 TP53TG5Q9Y2B4 290 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 ODAMA1E959 279 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 FAM157AC9JC47 383 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 SPRY3O43610 288 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 CLDN1O95832 211 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 IFNA10P01566 189 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 EGR1P18146 543 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 TNFSF4P23510 183 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 EDDM3AQ14507 147 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 IZUMO4Q1ZYL8 232 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 TPRX1Q8N7U7 411 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 JPT1Q9UK76 154 aa10.54□□□□□ -0.72
VPS16-202ENST00000380445 PRR14LQ5THK1 2151 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 hCG_1809904A0A1W2PP81 198 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 A0A1W2PR64 198 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 A0A1W2PRV1 198 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 C15orf65H3BRN8 121 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 LHBP01229 141 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 TFF1P04155 84 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 HOXA5P20719 270 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 CD40P25942 277 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 TMEM108Q6UXF1 575 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 DPPA3Q6W0C5 159 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 DOLPP1Q86YN1 238 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 ZNF808Q8N4W9 903 aaPredicted RBP10.53□□□□□ -0.72
VPS16-202ENST00000380445 CD300LFQ8TDQ1 290 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 IL19Q9UHD0 177 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 C9JQL5 133 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 NUP37Q8NFH4 326 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 ITLN1Q8WWA0 313 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 GAR1Q9NY12 217 aaKnown RBP10.53□□□□□ -0.72
VPS16-202ENST00000380445 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
VPS16-202ENST00000380445 A0A1B0GW64 132 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 H3BP45 60 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.73
VPS16-202ENST00000380445 UBE2KP61086 200 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 PKIAP61925 76 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 FOXC1Q12948 553 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
VPS16-202ENST00000380445 RFESDQ8TAC1 157 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.52□□□□□ -0.73
VPS16-202ENST00000380445 CACNA1DQ01668 2161 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 C16orf97H3BN30 126 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 YPEL1O60688 119 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 KRASP01116 189 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 TLE4Q04727 773 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 CISD2Q8N5K1 135 aaKnown RBP10.52□□□□□ -0.73
VPS16-202ENST00000380445 YPEL2Q96QA6 119 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 MRPL37Q9BZE1 423 aaKnown RBP10.52□□□□□ -0.73
VPS16-202ENST00000380445 RNF7Q9UBF6 113 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 GNG12Q9UBI6 72 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 PSG11Q9UQ72 335 aa10.52□□□□□ -0.73
VPS16-202ENST00000380445 IGHV3-43A0A0B4J1X8 118 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 RAMP3O60896 148 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 CLDN14O95500 239 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 IFNA17P01571 189 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 IGHV3-43DP0DP04 118 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 IAPPP10997 89 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 RPL30P62888 115 aaKnown RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 TNFAIP6P98066 277 aaPredicted RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 TMEM267Q0VDI3 215 aaPredicted RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 ZNF816Q0VGE8 651 aaPredicted RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 GFRALQ6UXV0 394 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 SCRT1Q9BWW7 348 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 PRO1933Q9H354 126 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 TUBA4BQ9H853 241 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 RAB29O14966 203 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 SNRNP70P08621 437 aaKnown RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 G6PCP35575 357 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 COTL1Q14019 142 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 KCNJ16Q9NPI9 418 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 Q9UFV3 132 aa10.51□□□□□ -0.73
VPS16-202ENST00000380445 CHD3Q12873 2000 aaKnown RBP10.51□□□□□ -0.73
VPS16-202ENST00000380445 ZFHX4Q86UP3 3567 aa10.5□□□□□ -0.73
VPS16-202ENST00000380445 IGHV3OR15-7A0A075B7D8 119 aa10.5□□□□□ -0.73
VPS16-202ENST00000380445 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms