RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 CLRN1P58418 232 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 TPTE2P1Q5T6R2 138 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 TMEM42Q69YG0 159 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 FAM222BQ8WU58 562 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 TCTEX1D2Q8WW35 142 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PYGO2Q9BRQ0 406 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 hCG_38984A0A1B0GV85 526 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 FOXH1O75593 365 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PGLYRP1O75594 196 aaPredicted RBP6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 RPL23AP62750 156 aaKnown RBP6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 USP24Q9UPU5 2620 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 CFAP46Q8IYW2 2715 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 TRAV38-1A0A0B4J264 116 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 MEGF11A6BM72 1044 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 CELA3BP08861 270 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 GPM6AP51674 278 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 RAB4BP61018 213 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PMS2P11Q13670 270 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 SPATA46Q5T0L3 261 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 SPATA31B1PQ5VZV4 182 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PRR7Q8TB68 274 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 KIAA1456Q9P272 454 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 A0A1W2PPQ1 181 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 HS3ST1O14792 307 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 COX6B1P14854 86 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 IL3RAP26951 378 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 ZNF41P51814 821 aaPredicted RBP6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 HLA-DRB3P79483 266 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PMP22Q01453 160 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 ITLN2Q8WWU7 325 aaPredicted RBP6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 FAM168AQ92567 244 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 NDUFAF3Q9BU61 184 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PARLQ9H300 379 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 PLEK2Q9NYT0 353 aa6.12□□□□□ -1.43
GPCPD1-201ENST00000379019 ZNF716A6NP11 495 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 ZNF732B4DXR9 585 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 SPINK4O60575 86 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 RAB4AP20338 218 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 CTSSP25774 331 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 SPCS3P61009 180 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 GNB1P62873 340 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 MRPS34P82930 218 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 PAX5Q02548 391 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 RNPS1Q15287 305 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 CENPVQ7Z7K6 275 aaPredicted RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 YRDCQ86U90 279 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 DOLPP1Q86YN1 238 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 NINJ1Q92982 152 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 PBDC1Q9BVG4 233 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 SIRT7Q9NRC8 400 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 CLN8Q9UBY8 286 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 LAMP3Q9UQV4 416 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TMEM127O75204 238 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 CA1P00915 261 aaPredicted RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TUBG1P23258 451 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 SRPXP78539 464 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 KLHL24Q6TFL4 600 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 ASCL4Q6XD76 172 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 RDH5Q92781 318 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 PGAM5Q96HS1 289 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TMEM56Q96MV1 263 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TMEM56-RWDD3S4R434 201 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TRAV3A0A0B4J244 114 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 ZNF816-ZNF321PA0A0X1KG74 233 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 AQP7P3A6NL99 342 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 ST8SIA3O43173 380 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 PSPNO60542 156 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 KRTAP27-1Q3LI81 207 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 KIAA1644Q3SXP7 199 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TMEM183AQ8IXX5 376 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 FGFRL1Q8N441 504 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 NUDT16L1Q9BRJ7 211 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 TUSC2O75896 110 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 RBM11P57052 281 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 CYCSP99999 105 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 BAXQ07812 192 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 MLANAQ16655 118 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 THEM4Q5T1C6 240 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 DMRTA1Q5VZB9 504 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 LCN12Q6JVE5 192 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 OR1P1Q8NH06 330 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 OR6X1Q8NH79 312 aa6.11□□□□□ -1.43
GPCPD1-201ENST00000379019 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 LINC00473A8K010 186 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 PPP1R2P9O14990 202 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 ADMP35318 185 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 PDLIM4P50479 330 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 SRSF1Q07955 248 aaKnown RBP eCLIP6.1□□□□□ -1.433e-7■■■■□ 19.7
GPCPD1-201ENST00000379019 MRGPRGQ86SM5 289 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 OR10G8Q8NGN5 311 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 MRPL30Q8TCC3 161 aaKnown RBP6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 RNASE6Q93091 150 aaKnown RBP6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 LUZP4Q9P127 313 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 RNF150Q9ULK6 438 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 CBLN1P23435 193 aa6.1□□□□□ -1.43
GPCPD1-201ENST00000379019 S100A7P31151 101 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms