RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 AIREO43918 545 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 SOX15O60248 233 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 IGLV2-23P01705 113 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
RAB4B-202ENST00000378307 RPS16P62249 146 aaKnown RBP12□□□□□ -0.49
RAB4B-202ENST00000378307 ARL6IP1Q15041 203 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF436-AS1Q8NC38 126 aaPredicted RBP12□□□□□ -0.49
RAB4B-202ENST00000378307 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 RNF5Q99942 180 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 GINS4Q9BRT9 223 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
RAB4B-202ENST00000378307 DCSTAMPQ9H295 470 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 METTL1Q9UBP6 276 aaKnown RBP12□□□□□ -0.49
RAB4B-202ENST00000378307 ETV7Q9Y603 341 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 TRAV41A0A0B4J266 112 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 SRRM4A7MD48 611 aaKnown RBP11.99□□□□□ -0.49
RAB4B-202ENST00000378307 RBBP9O75884 186 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 NFYAP23511 347 aaPredicted RBP11.99□□□□□ -0.49
RAB4B-202ENST00000378307 MYCNOSP40205 109 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 SCAND1P57086 179 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 GNG2P59768 71 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 KRTAP10-11P60412 298 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
RAB4B-202ENST00000378307 PLGLAQ15195 96 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF660Q6AZW8 331 aaPredicted RBP11.99□□□□□ -0.49
RAB4B-202ENST00000378307 GVQW1Q8N7I0 195 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 GNB4Q9HAV0 340 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
RAB4B-202ENST00000378307 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 NUBP2Q9Y5Y2 271 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 A3GALT2U3KPV4 340 aa11.99□□□□□ -0.49
RAB4B-202ENST00000378307 IGKV1D-13A0A0B4J2D9 117 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 LINC00473A8K010 186 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 CCL24O00175 119 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 ARPC1BO15143 372 aaKnown RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 SCGNO76038 276 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 CA2P00918 260 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 IGLV2-14P01704 120 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 CRYGBP07316 175 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 IGKV1-13P0DP09 117 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 DUTP33316 252 aaKnown RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 CRIP2P52943 208 aaPredicted RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 PJVKQ0ZLH3 352 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 ECSCRQ19T08 205 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 TIMM50Q3ZCQ8 353 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 PDPNQ86YL7 162 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 BVESQ8NE79 360 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 DDB2Q92466 427 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 FLYWCH2Q96CP2 140 aaKnown RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 RCC1LQ96I51 464 aaKnown RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 RBM7Q9Y580 266 aaKnown RBP11.98□□□□□ -0.49
RAB4B-202ENST00000378307 TNCP24821 2201 aa11.98□□□□□ -0.49
RAB4B-202ENST00000378307 SLC25A17O43808 307 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 HLA-DQB1P01920 261 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 APOA2P02652 100 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 FCER2P06734 321 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 SMIM18P0DKX4 95 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 OR5H8P0DN80 308 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 SLC6A1P30531 599 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 HOXD3P31249 432 aaPredicted RBP11.97□□□□□ -0.49
RAB4B-202ENST00000378307 NCS1P62166 190 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 PITPNAQ00169 270 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 CNIH2Q6PI25 160 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 FUNDC2Q9BWH2 189 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 AUNIPQ9H7T9 357 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 NECAP2Q9NVZ3 263 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 ANXA10Q9UJ72 324 aa11.97□□□□□ -0.49
RAB4B-202ENST00000378307 A0A1W2PN81 502 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 CHRNA7P36544 502 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 RAB9AP51151 201 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 RPL30P62888 115 aaKnown RBP11.96□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 PPP1R27Q86WC6 154 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 C4orf3Q8WVX3 66 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 OR5B12Q96R08 314 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 TSNAXQ99598 290 aaKnown RBP11.96□□□□□ -0.49
RAB4B-202ENST00000378307 VCX3AQ9NNX9 186 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 OR2W1Q9Y3N9 320 aa11.96□□□□□ -0.49
RAB4B-202ENST00000378307 MEIS3P1A6NDR6 274 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 I3L521 148 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 TUSC2O75896 110 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 SPDEFO95238 335 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 CTXN2P0C2S0 81 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 LUMP51884 338 aaPredicted RBP11.95□□□□□ -0.5
RAB4B-202ENST00000378307 VBP1P61758 197 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 GNB1P62873 340 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 TMEM177Q53S58 311 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 ASPHD1Q5U4P2 390 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 ZNF645Q8N7E2 425 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 OR13F1Q8NGS4 319 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms