RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 TNFSF18Q9UNG2 199 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 WIPI2Q9Y4P8 454 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 MYH11P35749 1972 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 A0A0B4J2E0 115 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 A0A0G2JLM5 398 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 A0A1B0GX12 115 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 SOD3P08294 240 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 CTSSP25774 331 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 SELENOPP49908 381 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 UCP3P55916 312 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 EEF1AKMT3Q96AZ1 226 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 PARLQ9H300 379 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 MYF5P13349 255 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 LY6EQ16553 131 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 TEX37Q96LM6 180 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 JMJD8Q96S16 334 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 LOC102723996A0A087X1L8 192 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 PLPP2O43688 288 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 FOXH1O75593 365 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 PCP4P48539 62 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 DUX3Q96PT4 197 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 LRRC61Q9BV99 259 aa9.26□□□□□ -0.93
RTN3-206ENST00000377819 NDUFB4O95168 129 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 HMGA2P52926 109 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 C1orf185Q5T7R7 199 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 FBXW9Q5XUX1 488 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 ZNF562Q6V9R5 426 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 IGLV3-10A0A075B6K4 115 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 DLL1O00548 723 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 MUC1P15941 1255 aaPredicted RBP9.25□□□□□ -0.93
RTN3-206ENST00000377819 PAX2Q02962 417 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 P2RY6Q15077 328 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 CLPPQ16740 277 aaPredicted RBP9.25□□□□□ -0.93
RTN3-206ENST00000377819 LINC00596Q86U02 117 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 GCSAMQ8N6F7 178 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 CISD1Q9NZ45 108 aaKnown RBP9.25□□□□□ -0.93
RTN3-206ENST00000377819 A0A087WX48 190 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 IGHV1OR21-1A0A087WYE8 117 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 TSPAN2O60636 221 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 BCL2P10415 239 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 MYOGP15173 224 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 MPV17P39210 176 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 FGF11Q92914 225 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 WDR34Q96EX3 536 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 DNAJC4Q9NNZ3 241 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 ZNF407Q9C0G0 2248 aa9.25□□□□□ -0.93
RTN3-206ENST00000377819 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 OTX1P32242 354 aaPredicted RBP9.24□□□□□ -0.93
RTN3-206ENST00000377819 MEF2BQ02080 365 aaPredicted RBP9.24□□□□□ -0.93
RTN3-206ENST00000377819 SPINK14Q6IE38 97 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 C1orf210Q8IVY1 113 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 SEMA5BQ9P283 1151 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 CTDSPLO15194 276 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 C8orf88P0DMB2 117 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 ATP6V0CP27449 155 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 CKS1BP61024 79 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 NKG7Q16617 165 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 ST3GAL2Q16842 350 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 TMEM240Q5SV17 173 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 A0A1W2PPE3 182 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 M0R381 172 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.931e-11■■■□□ 15.7
RTN3-206ENST00000377819 TMEM50AO95807 157 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 PLNP26678 52 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 RSPO2Q6UXX9 243 aaPredicted RBP9.24□□□□□ -0.93
RTN3-206ENST00000377819 PAQR9Q6ZVX9 377 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 GVQW1Q8N7I0 195 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 MDC1Q14676 2089 aaKnown RBP9.24□□□□□ -0.93
RTN3-206ENST00000377819 LOC285556D6RIA3 1793 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 LINC01587Q99440 93 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 CCL13Q99616 98 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 CCDC88AQ3V6T2 1871 aa9.24□□□□□ -0.93
RTN3-206ENST00000377819 TRAV24A0A0B4J272 114 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 SAA1P0DJI8 122 aaPredicted RBP9.23□□□□□ -0.93
RTN3-206ENST00000377819 PDLIM4P50479 330 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 DCAF12L2Q5VW00 463 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 WFDC5Q8TCV5 224 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 LINC00615Q96LM1 132 aaPredicted RBP9.23□□□□□ -0.93
RTN3-206ENST00000377819 RRHO14718 337 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 NAT1P18440 290 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 EFNB2P52799 333 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 LCN2P80188 198 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
RTN3-206ENST00000377819 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 MRPL24Q96A35 216 aaKnown RBP9.23□□□□□ -0.93
RTN3-206ENST00000377819 MARVELD3Q96A59 401 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 KCNK7Q9Y2U2 307 aa9.23□□□□□ -0.93
RTN3-206ENST00000377819 CACNA1HO95180 2353 aa9.22□□□□□ -0.93
RTN3-206ENST00000377819 PLPP3O14495 311 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms