RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 WFDC9Q8NEX5 89 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 BEST4Q8NFU0 473 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 OR13F1Q8NGS4 319 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 RCC1LQ96I51 464 aaKnown RBP17.37■□□□□ 0.37
SRM-201ENST00000376957 GPR61Q9BZJ8 451 aa17.37■□□□□ 0.37
SRM-201ENST00000376957 VWFP04275 2813 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 ATP6V0E1O15342 81 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 XRCC3O43542 346 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 PROP1O75360 226 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 MYCNOSP40205 109 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 CDX1P47902 265 aaPredicted RBP17.36■□□□□ 0.37
SRM-201ENST00000376957 ZNF645Q8N7E2 425 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 AUNIPQ9H7T9 357 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 IFT46Q9NQC8 304 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 NECAP2Q9NVZ3 263 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 PRELID3BQ9Y3B1 194 aa17.36■□□□□ 0.37
SRM-201ENST00000376957 PLXNB1O43157 2135 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 IGKV1D-8A0A087WSZ0 117 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 G3V4G9 280 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 SHOXO15266 292 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 IGKV1-16P04430 117 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 TGFBR1P36897 503 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 PSG5Q15238 335 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 TMEM69Q5SWH9 247 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 SAMD5Q5TGI4 173 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 ZNF562Q6V9R5 426 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 HOGA1Q86XE5 327 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 RNF152Q8N8N0 203 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 ACOT12Q8WYK0 555 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 RBMXL1Q96E39 390 aaKnown RBP17.35■□□□□ 0.37
SRM-201ENST00000376957 HARBI1Q96MB7 349 aa17.35■□□□□ 0.37
SRM-201ENST00000376957 MCRIP2Q9BUT9 160 aaKnown RBP17.35■□□□□ 0.37
SRM-201ENST00000376957 MRPS26Q9BYN8 205 aaKnown RBP17.35■□□□□ 0.37
SRM-201ENST00000376957 SSX5O60225 188 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 HLA-DQB1P01920 261 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 RPLP1P05386 114 aaKnown RBP17.34■□□□□ 0.37
SRM-201ENST00000376957 NFYAP23511 347 aaPredicted RBP17.34■□□□□ 0.37
SRM-201ENST00000376957 RORCP51449 518 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 VBP1P61758 197 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 CX3CL1P78423 397 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 REC114Q7Z4M0 266 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 AP3S1Q92572 193 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 CMTM3Q96MX0 182 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 MRPS7Q9Y2R9 242 aaKnown RBP17.34■□□□□ 0.37
SRM-201ENST00000376957 WSB1Q9Y6I7 421 aa17.34■□□□□ 0.37
SRM-201ENST00000376957 J3QRK9 145 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 CNIH1O95406 144 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 CFHR3Q02985 330 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 PDLIM3Q53GG5 364 aaPredicted RBP17.33■□□□□ 0.36
SRM-201ENST00000376957 PYHIN1Q6K0P9 492 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 MZT2AQ6P582 158 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 C8orf86Q6ZUL3 223 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 PPP1R27Q86WC6 154 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 BVESQ8NE79 360 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 DPF1Q92782 380 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 CLCC1Q96S66 551 aa17.33■□□□□ 0.36
SRM-201ENST00000376957 SLC25A17O43808 307 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 CREBL2O60519 120 aaPredicted RBP17.32■□□□□ 0.36
SRM-201ENST00000376957 PSMB8P28062 276 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 DUTP33316 252 aaKnown RBP17.32■□□□□ 0.36
SRM-201ENST00000376957 NCS1P62166 190 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 ECSCRQ19T08 205 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 VMA21Q3ZAQ7 101 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 OXLD1Q5BKU9 147 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 ANKRD13BQ86YJ7 626 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 BORCS5Q969J3 196 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 HSD17B10Q99714 261 aaKnown RBP17.32■□□□□ 0.36
SRM-201ENST00000376957 DCUN1D5Q9BTE7 237 aa17.32■□□□□ 0.36
SRM-201ENST00000376957 FOXA2Q9Y261 457 aaPredicted RBP17.32■□□□□ 0.36
SRM-201ENST00000376957 G3V318 75 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 TUSC2O75896 110 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 PPIFP30405 207 aaKnown RBP17.31■□□□□ 0.36
SRM-201ENST00000376957 CRIP2P52943 208 aaPredicted RBP17.31■□□□□ 0.36
SRM-201ENST00000376957 BEAN1Q3B7T3 259 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 AKIRIN2Q53H80 203 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 TMEM177Q53S58 311 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 GPR141Q7Z602 305 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 OR5AP2Q8NGF4 316 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 OSR1Q8TAX0 266 aaPredicted RBP17.31■□□□□ 0.36
SRM-201ENST00000376957 C4orf3Q8WVX3 66 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 UBE2E2Q96LR5 201 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 COMMD3Q9UBI1 195 aa17.31■□□□□ 0.36
SRM-201ENST00000376957 A0A1W2PN81 502 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 CCL24O00175 119 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 CA2P00918 260 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 FCGR2CP31995 323 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 PRSS3P35030 304 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 CHRNA7P36544 502 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 LINC00205P59089 165 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 FXYD3Q14802 87 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 ACTBL2Q562R1 376 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 KPRPQ5T749 579 aaPredicted RBP17.3■□□□□ 0.36
SRM-201ENST00000376957 UNQ5815/PRO19632Q6UWF5 114 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 KCTD9Q7L273 389 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 MRPL41Q8IXM3 137 aaKnown RBP17.3■□□□□ 0.36
SRM-201ENST00000376957 GVQW1Q8N7I0 195 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 MINDY2Q8NBR6 621 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 OR5M8Q8NGP6 311 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 ARPC1AQ92747 370 aa17.3■□□□□ 0.36
SRM-201ENST00000376957 ZMAT5Q9UDW3 170 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms