RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 IFI27L2Q9H2X8 130 aa17.36■□□□□ 0.37
HLA-C-201ENST00000376228 C2CD3Q4AC94 2353 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 OMGP23515 440 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF134P52741 427 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 RIPPLY3P57055 190 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 TMEM33P57088 247 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF273Q14593 569 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 LTC4SQ16873 150 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 ZNF841Q6ZN19 808 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 CHODLQ9H9P2 273 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 MIOXQ9UGB7 285 aa17.35■□□□□ 0.37
HLA-C-201ENST00000376228 NSD1Q96L73 2696 aaPredicted RBP17.35■□□□□ 0.37
HLA-C-201ENST00000376228 VWC2LB2RUY7 222 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 PROP1O75360 226 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 RLN2P04090 185 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 GPR12P47775 334 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 CT45A1Q5HYN5 189 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 INO80EQ8NBZ0 244 aaPredicted RBP17.34■□□□□ 0.37
HLA-C-201ENST00000376228 CT45A3Q8NHU0 189 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 ABHD14AQ9BUJ0 271 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 BPESC1Q9GZL8 116 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 ARL6Q9H0F7 186 aa17.34■□□□□ 0.37
HLA-C-201ENST00000376228 ABCA1O95477 2261 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 A0A1B0GU03 582 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 DEDDO75618 318 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 IGKV1-39P01597 117 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 IGKV1D-39P04432 117 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 DLX6P56179 175 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 RPL30P62888 115 aaKnown RBP17.33■□□□□ 0.37
HLA-C-201ENST00000376228 TEX261Q6UWH6 196 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 C8orf31Q8N9H6 132 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 OR1S1Q8NH92 325 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 CD300LFQ8TDQ1 290 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 DCUN1D4Q92564 292 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 RAB39BQ96DA2 213 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 U3KQ87 197 aa17.33■□□□□ 0.37
HLA-C-201ENST00000376228 MBPP02686 304 aaPredicted RBP17.32■□□□□ 0.36
HLA-C-201ENST00000376228 DUTP33316 252 aaKnown RBP17.32■□□□□ 0.36
HLA-C-201ENST00000376228 LOXL1Q08397 574 aaPredicted RBP17.32■□□□□ 0.36
HLA-C-201ENST00000376228 SMCO1Q147U7 214 aa17.32■□□□□ 0.36
HLA-C-201ENST00000376228 SLC25A48Q6ZT89 311 aaKnown RBP17.32■□□□□ 0.36
HLA-C-201ENST00000376228 C8orf46Q8TAG6 207 aa17.32■□□□□ 0.36
HLA-C-201ENST00000376228 H1FXQ92522 213 aaKnown RBP17.32■□□□□ 0.36
HLA-C-201ENST00000376228 AQP10Q96PS8 301 aa17.32■□□□□ 0.36
HLA-C-201ENST00000376228 OR5AC2Q9NZP5 309 aa17.32■□□□□ 0.36
HLA-C-201ENST00000376228 INAFM1C9JVW0 142 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 K7EPK0 472 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 NDUFS8O00217 210 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 ST8SIA3O43173 380 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 PITX3O75364 302 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 ATG12O94817 140 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 USF1P22415 310 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 TMEM249Q2WGJ8 235 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 THOC7Q6I9Y2 204 aaKnown RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 FAM219AQ8IW50 185 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 FAM71E2Q8N5Q1 922 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 NEIL1Q96FI4 390 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 POMT1Q9Y6A1 747 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 FN1P02751 2386 aaKnown RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 A0A087X0M5 115 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 IGHV4-61A0A0C4DH41 118 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 A0A1B0GX30 115 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 RAB29O14966 203 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 RBFOX2O43251 390 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 TSC22D2O75157 780 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 MMP23AO75900 390 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 ZNF16P17020 682 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 HOXB4P17483 251 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 NUP62P37198 522 aaPredicted RBP17.31■□□□□ 0.36
HLA-C-201ENST00000376228 LPAR6P43657 344 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 BRWD1-AS2P59051 145 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 S100A10P60903 97 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 ID3Q02535 119 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 PRAMEF5Q5TYX0 476 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 ZNF596Q8TC21 504 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 TCTEX1D2Q8WW35 142 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 GPR146Q96CH1 333 aa17.31■□□□□ 0.36
HLA-C-201ENST00000376228 LINC00473A8K010 186 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 E5RGE8 158 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 SLC31A2O15432 143 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 NFYBP25208 207 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 SLC51BQ86UW2 128 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 ODF3L1Q8IXM7 274 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 LINC00311Q8N616 119 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 ZNF680Q8NEM1 530 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 OR8H1Q8NGG4 311 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 OR8B3Q8NGG8 313 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 RRNAD1Q96FB5 475 aaKnown RBP17.3■□□□□ 0.36
HLA-C-201ENST00000376228 OR8B2Q96RD0 313 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 ZNF251Q9BRH9 671 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 PLEKHA2Q9HB19 425 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 COA4Q9NYJ1 87 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 NSG2Q9Y328 171 aa17.3■□□□□ 0.36
HLA-C-201ENST00000376228 ANK3Q12955 4377 aaKnown RBP17.3■□□□□ 0.36
HLA-C-201ENST00000376228 MALRD1Q5VYJ5 2156 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 C17orf98A8MV24 154 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 PPIHO43447 177 aaKnown RBP17.29■□□□□ 0.36
HLA-C-201ENST00000376228 BCL2L11O43521 198 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 IGKV1-5P01602 117 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 RBP4P02753 201 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms