RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GPHA2Q96T91 129 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 AIFM2Q9BRQ8 373 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 TMEM133Q9H2Q1 129 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 BARX1Q9HBU1 254 aaPredicted RBP9.1□□□□□ -0.95
PDPN-202ENST00000376057 RCL1Q9Y2P8 373 aaKnown RBP9.1□□□□□ -0.95
PDPN-202ENST00000376057 ADGRG4Q8IZF6 3080 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 NDUFS8O00217 210 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 TOR1AO14656 332 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 GPR137BO60478 399 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 LIPFP07098 398 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
PDPN-202ENST00000376057 GPR6P46095 362 aaPredicted RBP9.1□□□□□ -0.95
PDPN-202ENST00000376057 MIDNQ504T8 468 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 NCR3LG1Q68D85 454 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 RAB40CQ96S21 281 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 CFAP46Q8IYW2 2715 aa9.1□□□□□ -0.95
PDPN-202ENST00000376057 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 M0R1X1 148 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 RAMP3O60896 148 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 GAPDHP04406 335 aaKnown RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 CCL3L1P16619 93 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 OR4S2Q8NH73 311 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 UNKLQ9H9P5 680 aaKnown RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 DIDO1Q9BTC0 2240 aaKnown RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 IL6RP08887 468 aaPredicted RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 NFYBP25208 207 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 RPL12P30050 165 aaKnown RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 S100A10P60903 97 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 LTC4SQ16873 150 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 OR52E5Q8NH55 327 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 SSBP3Q9BWW4 388 aaPredicted RBP9.09□□□□□ -0.95
PDPN-202ENST00000376057 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
PDPN-202ENST00000376057 PPIAL4CA0A0B4J2A2 164 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 MED6O75586 246 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 PPIAL4GP0DN37 164 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 CDKN1AP38936 164 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 AP2S1P53680 142 aaPredicted RBP9.09□□□□□ -0.96
PDPN-202ENST00000376057 PRRX1P54821 245 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 EIF5AP63241 154 aaKnown RBP9.09□□□□□ -0.96
PDPN-202ENST00000376057 RPL39P5Q59GN2 51 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 UTF1Q5T230 341 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 AVPI1Q5T686 147 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 BTNL3Q6UXE8 466 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 SMIM8Q96KF7 97 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 CYTL1Q9NRR1 136 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.09□□□□□ -0.96
PDPN-202ENST00000376057 LYRM2Q9NU23 88 aaPredicted RBP9.09□□□□□ -0.96
PDPN-202ENST00000376057 UBQLN2Q9UHD9 624 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 WSB1Q9Y6I7 421 aa9.09□□□□□ -0.96
PDPN-202ENST00000376057 SCAF4O95104 1147 aaKnown RBP9.08□□□□□ -0.96
PDPN-202ENST00000376057 S1PR2O95136 353 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 IGLV1-47P01700 117 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 ZNF16P17020 682 aaPredicted RBP9.08□□□□□ -0.96
PDPN-202ENST00000376057 IL3RAP26951 378 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 PDLIM4P50479 330 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 GNB2P62879 340 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 BAXQ07812 192 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 Q6ZRM9 215 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 LYG1Q8N1E2 194 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 OR8H1Q8NGG4 311 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 OR5AN1Q8NGI8 311 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 SLC25A31Q9H0C2 315 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
PDPN-202ENST00000376057 TXNL1O43396 289 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 NQO2P16083 231 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 AKR1C2P52895 323 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 ERVFRD-1P60508 538 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 STPG2Q8N412 459 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 SCARB1Q8WTV0 552 aa9.08□□□□□ -0.96
PDPN-202ENST00000376057 LOC105371242A0A075B767 164 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 TSC22D2O75157 780 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 DSCR9P59020 149 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 PAX2Q02962 417 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 EXOSC2Q13868 293 aaKnown RBP9.07□□□□□ -0.96
PDPN-202ENST00000376057 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
PDPN-202ENST00000376057 CLLU1Q5K131 121 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 ABHD12Q8N2K0 398 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 ZNF383Q8NA42 475 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 OR11H6Q8NGC7 330 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 R3HDM4Q96D70 268 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 CCL19Q99731 98 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 ARV1Q9H2C2 271 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 MSGN1A6NI15 193 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 MARCH11A6NNE9 402 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 VWC2LB2RUY7 222 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 IGHV4-39P01824 125 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 COX6B1P14854 86 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 H2BFWTQ7Z2G1 175 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 ZNF429Q86V71 674 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
PDPN-202ENST00000376057 OR2C3Q8N628 320 aa9.07□□□□□ -0.96
PDPN-202ENST00000376057 OSR1Q8TAX0 266 aaPredicted RBP9.07□□□□□ -0.96
PDPN-202ENST00000376057 ST8SIA2Q92186 375 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms