RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 FGF12P61328 243 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 FAM131CQ96AQ9 280 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 ZNF501Q96CX3 271 aaPredicted RBP11.8□□□□□ -0.52
COL4A1-201ENST00000375820 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 GPR146Q96CH1 333 aa11.8□□□□□ -0.52
COL4A1-201ENST00000375820 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
COL4A1-201ENST00000375820 PPIAL4CA0A0B4J2A2 164 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 S1PR2O95136 353 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 PPIAL4GP0DN37 164 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 TMEM252Q8N6L7 170 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 MGST3O14880 152 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 SNAI2O43623 268 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 C1QAP02745 245 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 ATP5J2P56134 94 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 SIAH2O43255 324 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 GDF9O60383 454 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 PF4P02776 101 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 ATP5G2Q06055 141 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 MDC1Q14676 2089 aaKnown RBP11.79□□□□□ -0.52
COL4A1-201ENST00000375820 COX6CP09669 75 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 FABP2P12104 132 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 CACNG7P62955 275 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 H1FOOQ8IZA3 346 aaPredicted RBP11.79□□□□□ -0.52
COL4A1-201ENST00000375820 C18orf15Q96N68 181 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 SRXN1Q9BYN0 137 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 DSPPQ9NZW4 1301 aa11.79□□□□□ -0.52
COL4A1-201ENST00000375820 IGKV1-8A0A0C4DH67 115 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 PTP4A3O75365 173 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 AMY1AP04745 511 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 SRIP30626 198 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 IDI2-AS1Q9NZ38 188 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 ASAH2BP0C7U1 165 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 SMIM6P0DI80 62 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 HTN3P15516 51 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 NPBWR2P48146 333 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 CRYBA2P53672 197 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
COL4A1-201ENST00000375820 APCDD1LQ8NCL9 501 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 FGF11Q92914 225 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 RAX2Q96IS3 184 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 CCL19Q99731 98 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 A0A0U1RQV5 110 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 HKR1P10072 659 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 GLIPR1P48060 266 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
COL4A1-201ENST00000375820 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
COL4A1-201ENST00000375820 COX19Q49B96 90 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 PNKDQ8N490 385 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A1-201ENST00000375820 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
COL4A1-201ENST00000375820 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 LOC101059948A0A1B0GTJ6 334 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 H0Y980 276 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 WNT9BO14905 357 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 WDR54Q9H977 334 aa11.78□□□□□ -0.52
COL4A1-201ENST00000375820 ISG15P05161 165 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 MIA3Q5JRA6 1907 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 A0A1W2PS18 150 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 FHITP49789 147 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 FAM27BQ5VT28 67 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.52
COL4A1-201ENST00000375820 A0A0B4J293 547 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 TMEM160Q9NX00 188 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 IRF3Q14653 427 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 STPG2Q8N412 459 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 OR4D5Q8NGN0 318 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 ZNF418Q8TF45 676 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-201ENST00000375820 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-201ENST00000375820 COL22A1Q8NFW1 1626 aaPredicted RBP11.77□□□□□ -0.53
COL4A1-201ENST00000375820 TMEM238LA0A1B0GVL6 79 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 A6NJY4 79 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
COL4A1-201ENST00000375820 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 DOCK5Q9H7D0 1870 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
COL4A1-201ENST00000375820 TMEM222Q9H0R3 208 aa11.77□□□□□ -0.53
COL4A1-201ENST00000375820 TSPAN13O95857 204 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 MFAP4P55083 255 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 DLL3Q9NYJ7 618 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 P2RY4P51582 365 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 TAF15Q92804 592 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL4A1-201ENST00000375820 LINC00470Q9BZP3 86 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 GEMIN7Q9H840 131 aaKnown RBP11.76□□□□□ -0.53
COL4A1-201ENST00000375820 F5P12259 2224 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 MCM3APO60318 1980 aa11.76□□□□□ -0.53
COL4A1-201ENST00000375820 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms