RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BSXQ3C1V8 233 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 Q6ZR03 302 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 OR10A7Q8NGE5 316 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 ACTR3CQ9C0K3 210 aaPredicted RBP12.18□□□□□ -0.46
MSH5-201ENST00000375703 AGFG2O95081 481 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 C16orf82Q7Z2V1 217 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 CIB3Q96Q77 187 aaPredicted RBP12.18□□□□□ -0.46
MSH5-201ENST00000375703 MRPL37Q9BZE1 423 aaKnown RBP12.18□□□□□ -0.46
MSH5-201ENST00000375703 CXXC4Q9H2H0 198 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 UFSP2Q9NUQ7 469 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 CHD3Q12873 2000 aaKnown RBP12.18□□□□□ -0.46
MSH5-201ENST00000375703 TMEM250H0YL14 139 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 PHOX2AO14813 284 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 FABP4P15090 132 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 COX5AP20674 150 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 TPRX1Q8N7U7 411 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 PFDN5Q99471 154 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
MSH5-201ENST00000375703 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
MSH5-201ENST00000375703 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
MSH5-201ENST00000375703 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 LINC00205P59089 165 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 RPL23P62829 140 aaKnown RBP12.17□□□□□ -0.46
MSH5-201ENST00000375703 TFF3Q07654 80 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 SPINK9Q5DT21 86 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 Q6ZT83 130 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
MSH5-201ENST00000375703 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 TRIB1Q96RU8 372 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 DEFB108AA8MXU0 73 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 RNF224P0DH78 156 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 CNEP1R1Q8N9A8 125 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 RAB24Q969Q5 203 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 TAAR6Q96RI8 345 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 PARLQ9H300 379 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 MANBALQ9NQG1 85 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
MSH5-201ENST00000375703 KNTC1P50748 2209 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 LINC00473A8K010 186 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 SSTR5P35346 364 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 COL10A1Q03692 680 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 ZNF66Q6ZN08 573 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 SNX22Q96L94 193 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
MSH5-201ENST00000375703 SP9P0CG40 484 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 HOXC12P31275 282 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 FABP6P51161 128 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 OR13A1Q8NGR1 328 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 PSG11Q9UQ72 335 aa12.16□□□□□ -0.46
MSH5-201ENST00000375703 GNB2P62879 340 aa12.15□□□□□ -0.46
MSH5-201ENST00000375703 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
MSH5-201ENST00000375703 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
MSH5-201ENST00000375703 MSL2Q9HCI7 577 aa12.15□□□□□ -0.46
MSH5-201ENST00000375703 WASF3Q9UPY6 502 aa12.15□□□□□ -0.46
MSH5-201ENST00000375703 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 H7BYZ3 331 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 PAGE4O60829 102 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.47
MSH5-201ENST00000375703 TUBG1P23258 451 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 GALR1P47211 349 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 TNFSF10P50591 281 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 SOX8P57073 446 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 C21orf62-AS1Q17RA5 79 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 VWC2Q2TAL6 325 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 PYGO2Q9BRQ0 406 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 GAB2Q9UQC2 676 aa12.15□□□□□ -0.47
MSH5-201ENST00000375703 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.47
MSH5-201ENST00000375703 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 ZNF891A8MT65 544 aaPredicted RBP12.14□□□□□ -0.47
MSH5-201ENST00000375703 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 WDR31Q8NA23 367 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 SPINT2O43291 252 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 SSTP61278 116 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 LTC4SQ16873 150 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
MSH5-201ENST00000375703 TECTAO75443 2155 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms