RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NFAM1Q8NET5 270 aaPredicted RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 WFDC5Q8TCV5 224 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SLC25A46Q96AG3 418 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SMIM14Q96QK8 99 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SLC25A33Q9BSK2 321 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 PRTFDC1Q9NRG1 225 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SIGLEC8Q9NYZ4 499 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 FUT9Q9Y231 359 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SIRT4Q9Y6E7 314 aaPredicted RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 NCKAP5O14513 1909 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 IGLV3-16A0A075B6K0 115 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TM4SF5O14894 197 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 ZIC3O60481 467 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 LILRA1O75019 489 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 CT45A8P0DMV1 189 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 CT45A9P0DMV2 189 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 VSIG10L2P0DP72 767 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SLC25A6P12236 298 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 ZNF708P17019 499 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 RPL13AP40429 203 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 CLDN6P56747 220 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 RPS14P62263 151 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 C1DQ13901 141 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 DIAPH2-AS1Q14236 149 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 ZNF146Q15072 292 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 SPATA45Q537H7 98 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 CT45A2Q5DJT8 189 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 ENTPD8Q5MY95 495 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TMEM91Q6ZNR0 172 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TTC9CQ8N5M4 171 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 DEFB125Q8N687 156 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TCEANCQ8N8B7 351 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TMEM229BQ8NBD8 167 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 PNRC2Q9NPJ4 139 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 GGT3PA6NGU5 568 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 TAPBPO15533 448 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 OR2H2O95918 312 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 IGF1P05019 195 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 HOXB6P17509 224 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 ZNF260Q3ZCT1 412 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 HIST1H2AAQ96QV6 131 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
USP48-203ENST00000374732 ZNF732B4DXR9 585 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 PGLYRP1O75594 196 aaPredicted RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 SLC25A14O95258 325 aaPredicted RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 APOA2P02652 100 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 CELA2AP08217 269 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 CD99P14209 185 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 HSPE1P61604 102 aaKnown RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 CD164Q04900 197 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 HMGN2P46Q86SG4 172 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 TGIF2LYQ8IUE0 185 aa6.65□□□□□ -1.34
USP48-203ENST00000374732 ZCCHC24Q8N2G6 241 aaKnown RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 ISG20L2Q9H9L3 353 aaKnown RBP6.65□□□□□ -1.34
USP48-203ENST00000374732 PLXNB3Q9ULL4 1909 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 OR2M5A3KFT3 312 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.35
USP48-203ENST00000374732 WDR5P61964 334 aaKnown RBP6.65□□□□□ -1.35
USP48-203ENST00000374732 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.35
USP48-203ENST00000374732 TNFAIP6P98066 277 aaPredicted RBP6.65□□□□□ -1.35
USP48-203ENST00000374732 TCEAL5Q5H9L2 206 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 OR5AU1Q8NGC0 362 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 SPIN2AQ99865 258 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 SPIN2BQ9BPZ2 258 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 RHNO1Q9BSD3 238 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 ULBP3Q9BZM4 244 aa6.65□□□□□ -1.35
USP48-203ENST00000374732 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.35
USP48-203ENST00000374732 PCNTO95613 3336 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 IGHV2-26A0A0B4J1V2 119 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 ZNF727A8MUV8 499 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 H0YJW9 148 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 NUDT14O95848 222 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 CXorf1O96002 111 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 H1F0P07305 194 aaKnown RBP6.64□□□□□ -1.35
USP48-203ENST00000374732 CD70P32970 193 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 MFSD12Q6NUT3 480 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 SLC35F2Q8IXU6 374 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 AP1S3Q96PC3 154 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 WDR13Q9H1Z4 485 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 A0A0B4J2A0 478 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 A0A1W2PS29 197 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 GCSHP23434 173 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 PPP1CAP62136 330 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 PAGE3Q5JUK9 113 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 C22orf39Q6P5X5 142 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 CMTM4Q8IZR5 234 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 RASL10AQ92737 203 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 OR4K3Q96R72 315 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 JPT2Q9H910 190 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 SHPKQ9UHJ6 478 aa6.64□□□□□ -1.35
USP48-203ENST00000374732 TSPAN11A1L157 253 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 K7EP34 96 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 OR2A4O95047 310 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 NDUFA7O95182 113 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 TIAF1O95411 115 aa6.63□□□□□ -1.35
USP48-203ENST00000374732 CYB5AP00167 134 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms