RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 DAZAP2Q15038 168 aaPredicted RBP9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 PDZD11Q5EBL8 140 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 NCR3LG1Q68D85 454 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF774Q6NX45 483 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF474Q6S9Z5 364 aaPredicted RBP9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF525Q8N782 197 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF611Q8N823 705 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 TMEM45BQ96B21 275 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 GPR146Q96CH1 333 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 SNX22Q96L94 193 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 NEU1Q99519 415 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 C1QTNF5Q9BXJ0 243 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 OR2H1Q9GZK4 316 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 OR14J1Q9UGF5 321 aa9.66□□□□□ -0.86
TSPAN1-201ENST00000372003 SYNGR2O43760 224 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF32P17041 273 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 NDUFB7P17568 137 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 SRP14P37108 136 aaKnown RBP9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 FAM27E3Q08E93 113 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 C9orf135Q5VTT2 229 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 OR51G1Q8NGK1 321 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 PIGCQ92535 297 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 TMEM18Q96B42 140 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF665Q9H7R5 613 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 CCL28Q9NRJ3 127 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 JKAMPQ9P055 326 aa9.65□□□□□ -0.86
TSPAN1-201ENST00000372003 UBR5O95071 2799 aaPredicted RBP9.65□□□□□ -0.87
TSPAN1-201ENST00000372003 IGKV1D-13A0A0B4J2D9 117 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MAP1LC3B2A6NCE7 125 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 VENTXO95231 258 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MBP02144 154 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 SERPINE2P07093 398 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 SCTP09683 121 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 IGKV1-13P0DP09 117 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 PSG4Q00888 419 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 FBXW9Q5XUX1 488 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF880Q6PDB4 577 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 COLCA1Q6ZS62 124 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MKXQ8IYA7 352 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF295-AS1Q8N0V1 137 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF664Q8N3J9 261 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 HIST1H2AAQ96QV6 131 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MAP1LC3BQ9GZQ8 125 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 WDR61Q9GZS3 305 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 WNT5BQ9H1J7 359 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 PPP1R14DQ9NXH3 145 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 OR2W1Q9Y3N9 320 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 CEBPZOSA8MTT3 80 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 H7BYZ3 331 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 GGCTO75223 188 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF737O75373 536 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 HRASP01112 189 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 APLNRP35414 380 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 FOXG1P55316 489 aaPredicted RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 LCN2P80188 198 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 COL10A1Q03692 680 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 IQCJQ1A5X6 159 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ACTL10Q5JWF8 245 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 C16orf82Q7Z2V1 217 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 CALHM1Q8IU99 346 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 ALKBH3Q96Q83 286 aaPredicted RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 IMMP2LQ96T52 175 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 FOXB1Q99853 325 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 SMIM7Q9BQ49 75 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 CRLF2Q9HC73 371 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 PSENENQ9NZ42 101 aa9.64□□□□□ -0.87
TSPAN1-201ENST00000372003 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 CD300LBA8K4G0 201 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 C19orf84I3L1E1 186 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 DEGS1O15121 323 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 TCAPO15273 167 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 LYZL6O75951 148 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 CLDN1O95832 211 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 COX5BP10606 129 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 CD99P14209 185 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 RAB4AP20338 218 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 GALR1P47211 349 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 PSMB3P49720 205 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 TFF3Q07654 80 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 LCN15Q6UWW0 184 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 Q6ZT83 130 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 CXorf67Q86X51 503 aaPredicted RBP9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 MRPL37Q9BZE1 423 aaKnown RBP9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 SLC39A9Q9NUM3 307 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms