RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ZNF729A6NN14 1252 aaPredicted RBP16.81■□□□□ 0.28
LMO4-202ENST00000370544 ZNF660Q6AZW8 331 aaPredicted RBP16.81■□□□□ 0.28
LMO4-202ENST00000370544 TAF15Q92804 592 aaKnown RBP eCLIP16.81■□□□□ 0.28
LMO4-202ENST00000370544 TRAV20A0A0B4J274 112 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 KLRB1Q12918 225 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 GTF2H5Q6ZYL4 71 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 IGHV1-69-2A0A0G2JMI3 117 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 OR5AU1Q8NGC0 362 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 MRPL37Q9BZE1 423 aaKnown RBP16.81■□□□□ 0.28
LMO4-202ENST00000370544 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 S1PR2O95136 353 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 AQP10Q96PS8 301 aa16.81■□□□□ 0.28
LMO4-202ENST00000370544 ZNF430Q9H8G1 570 aaPredicted RBP16.81■□□□□ 0.28
LMO4-202ENST00000370544 F12P00748 615 aaPredicted RBP16.8■□□□□ 0.28
LMO4-202ENST00000370544 RPL7P18124 248 aaKnown RBP16.8■□□□□ 0.28
LMO4-202ENST00000370544 CRYBA2P53672 197 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 ASPHD2Q6ICH7 369 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 UNQ5815/PRO19632Q6UWF5 114 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 GUCD1Q96NT3 240 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 HSPE1P61604 102 aaKnown RBP16.8■□□□□ 0.28
LMO4-202ENST00000370544 HOXA4Q00056 320 aaPredicted RBP16.8■□□□□ 0.28
LMO4-202ENST00000370544 TNFRSF9Q07011 255 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 MIC13Q5XKP0 118 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 OR4C5Q8NGB2 326 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 OR9G1Q8NH87 305 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 ADAM11O75078 769 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 C1QL1O75973 258 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 PF4V1P10720 104 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 EAF1Q96JC9 268 aaPredicted RBP16.8■□□□□ 0.28
LMO4-202ENST00000370544 ZNF236Q9UL36 1845 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 OR2A4O95047 310 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 OR2A7Q96R45 310 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 PATJQ8NI35 1801 aa16.8■□□□□ 0.28
LMO4-202ENST00000370544 NMBP08949 121 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 SLC35B1P78383 322 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 TMEM30BQ3MIR4 351 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 SPANXN1Q5VSR9 72 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 IGKV1D-43A0A0B4J1Z2 117 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 A0A0G2JMM0 328 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 A0A1W2PPB8 328 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 A0A1W2PRS3 328 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 KIR3DP1A8MWS1 328 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 ZIC3O60481 467 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 PTBP3O95758 552 aaKnown RBP16.79■□□□□ 0.28
LMO4-202ENST00000370544 RND2P52198 227 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 VWA1Q6PCB0 445 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 Q6ZN92 141 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 METTL26Q96S19 204 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 ZG16O60844 167 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 NDUFB4O95168 129 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 PLAUP00749 431 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 TMEM187Q14656 261 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 WDFY1Q8IWB7 410 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 CRIPAKQ8N1N5 446 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 TLNRD1Q9H1K6 362 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 ARF6P62330 175 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 FADS6Q8N9I5 356 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 UCP3P55916 312 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 CLDN18P56856 261 aa16.79■□□□□ 0.28
LMO4-202ENST00000370544 LSM10Q969L4 123 aaKnown RBP16.79■□□□□ 0.28
LMO4-202ENST00000370544 LOC105371242A0A075B767 164 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 B9A039 149 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 H2BFSP57053 126 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 HERVK_113P61574 105 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 SGMS2Q8NHU3 365 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 ZNF708P17019 499 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 TIMM23BQ5SRD1 257 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 TMEM186Q96B77 213 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 RBM14Q96PK6 669 aaKnown RBP16.78■□□□□ 0.28
LMO4-202ENST00000370544 FAM209AQ5JX71 171 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 MUC15Q8N387 334 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 OR4C12Q96R67 309 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 ARID1AO14497 2285 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 hCG_38984A0A1B0GV85 526 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 LINC00114Q6XXX2 140 aa16.78■□□□□ 0.28
LMO4-202ENST00000370544 SSTR5P35346 364 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 TMEM78Q5T7P6 136 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 SLC35E4Q6ICL7 350 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 PCSK4Q6UW60 755 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 C16orf92Q96LL3 132 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 HSPB8Q9UJY1 196 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 CABIN1Q9Y6J0 2220 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 HSPB1P04792 205 aaKnown RBP16.77■□□□□ 0.28
LMO4-202ENST00000370544 NUBP1P53384 320 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 MRPL14Q6P1L8 145 aaKnown RBP16.77■□□□□ 0.28
LMO4-202ENST00000370544 LINC01560Q8TB33 94 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 IMMP1LQ96LU5 166 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 TXNDC17Q9BRA2 123 aa16.77■□□□□ 0.28
LMO4-202ENST00000370544 TMEM189A5PLL7 270 aa16.77■□□□□ 0.27
LMO4-202ENST00000370544 PPOXP50336 477 aa16.77■□□□□ 0.27
LMO4-202ENST00000370544 MEF2BQ02080 365 aaPredicted RBP16.77■□□□□ 0.27
LMO4-202ENST00000370544 RSPO4Q2I0M5 234 aaPredicted RBP16.77■□□□□ 0.27
LMO4-202ENST00000370544 ACSF3Q4G176 576 aaPredicted RBP16.77■□□□□ 0.27
LMO4-202ENST00000370544 CLEC7AQ9BXN2 247 aa16.77■□□□□ 0.27
LMO4-202ENST00000370544 QTRT1Q9BXR0 403 aaKnown RBP16.77■□□□□ 0.27
LMO4-202ENST00000370544 PITPNC1Q9UKF7 332 aa16.77■□□□□ 0.27
LMO4-202ENST00000370544 CHODLQ9H9P2 273 aa16.77■□□□□ 0.27
LMO4-202ENST00000370544 A0A1W2PS18 150 aa16.76■□□□□ 0.27
LMO4-202ENST00000370544 RPS11P62280 158 aaKnown RBP eCLIP16.76■□□□□ 0.27
LMO4-202ENST00000370544 DRAM1Q8N682 238 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms