RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FOXI3A8MTJ6 420 aaPredicted RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 TIMM8AO60220 97 aaPredicted RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 CRTAPO75718 401 aaPredicted RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 HCKP08631 526 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 RAC2P15153 192 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 TNFRSF1AP19438 455 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 DTYMKP23919 212 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 AKR1C3P42330 323 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 TMEM50BP56557 158 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 TNFAIP6P98066 277 aaPredicted RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 RSU1Q15404 277 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 SSX2Q16385 188 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 ETV3LQ6ZN32 361 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 OR51T1Q8NGJ9 327 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 C14orf144Q96I85 54 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 C1orf147Q96MC9 270 aaPredicted RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 JMJD8Q96S16 334 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 GPER1Q99527 375 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 SPIN2AQ99865 258 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 SPIN2BQ9BPZ2 258 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 NAA60Q9H7X0 242 aa12.38□□□□□ -0.43
LMO4-201ENST00000370542 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
LMO4-201ENST00000370542 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 DVL1O14640 695 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 SOCS1O15524 211 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 NDUFS6O75380 124 aaKnown RBP12.37□□□□□ -0.43
LMO4-201ENST00000370542 FOXH1O75593 365 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 FSTL3O95633 263 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 ARG1P05089 322 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 DDTP30046 118 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 GLIPR1P48060 266 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 UCP3P55916 312 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
LMO4-201ENST00000370542 ZNF124Q15973 351 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
LMO4-201ENST00000370542 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 C9orf152Q5JTZ5 239 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 FAM185AQ8N0U4 392 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 PECRQ9BY49 303 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 CTDSP1Q9GZU7 261 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 C7orf69Q9H7B7 122 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
LMO4-201ENST00000370542 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 H3BQ15 152 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 GPR37O15354 613 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PITX3O75364 302 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 CDS2O95674 445 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 RAB4AP20338 218 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 FGF7P21781 194 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 TNFSF4P23510 183 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 MTCP1P56278 107 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 ABCA11PQ4W5N1 156 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PRR31Q5SQ13 230 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 C1orf87Q8N0U7 546 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 OR10D4PQ8NGN7 298 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
LMO4-201ENST00000370542 PP6455Q8WZ26 134 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 RCC1LQ96I51 464 aaKnown RBP12.36□□□□□ -0.43
LMO4-201ENST00000370542 SSX3Q99909 188 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 ST6GALNAC5Q9BVH7 336 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PRDM13Q9H4Q3 707 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 ESM1Q9NQ30 184 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PUS1Q9Y606 427 aaKnown RBP eCLIP12.36□□□□□ -0.43
LMO4-201ENST00000370542 LHFPL6Q9Y693 200 aa12.36□□□□□ -0.43
LMO4-201ENST00000370542 PRKDCP78527 4128 aaKnown RBP12.36□□□□□ -0.43
LMO4-201ENST00000370542 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 TRAPPC2LH3BP13 241 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 TMEM178BH3BS89 294 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 RER1O15258 196 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 YIF1AO95070 293 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 KNG1P01042 644 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
LMO4-201ENST00000370542 DBHP09172 617 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 LCN2P80188 198 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 PAX2Q02962 417 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 BAXQ07812 192 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 TMEM187Q14656 261 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 ELOBQ15370 118 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 FOXRED2Q8IWF2 684 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms