RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ZG16O60844 167 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 GNB1P62873 340 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 MCEMP1Q8IX19 187 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 PRDM6Q9NQX0 595 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 TRAPPC2LQ9UL33 140 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 CBLN1P23435 193 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
PHGDH-201ENST00000369407 PPP1CBP62140 327 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 CEACAM21Q3KPI0 293 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 Q6ZWC4 215 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
PHGDH-201ENST00000369407 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM210A6NLX4 147 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 RBFOX2O43251 390 aaKnown RBP eCLIP10.36□□□□□ -0.757e-8■■□□□ 12.4
PHGDH-201ENST00000369407 IGFBP4P22692 258 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 OR10J1P30954 320 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 B3GALT5-AS1P59052 145 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 PCBD1P61457 104 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 TGFBR3Q03167 851 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 C1orf185Q5T7R7 199 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 C16orf54Q6UWD8 224 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 RPS19BP1Q86WX3 136 aaKnown RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 KIR2DL5BA0A0G2JN68 375 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 KIR2DL5BA0A0G2JPC4 375 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 DEGS1O15121 323 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 CBR3O75828 277 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 UMODP07911 640 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 GAGE1Q13065 139 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 KIR2DL5AQ8N109 375 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 LSM10Q969L4 123 aaKnown RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 SPSB4Q96A44 273 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 IGHV1-45A0A0A0MS14 117 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 M0QZK8 103 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 CA6P23280 308 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 SRP14P37108 136 aaKnown RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 CEBPDP49716 269 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 EDDM3BP56851 147 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 OR5A2Q8NGI9 324 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 FAM122AQ96E09 287 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 ALKBH7Q9BT30 221 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 FAM103A1Q9BTL3 118 aaKnown RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 SF3B5Q9BWJ5 86 aaKnown RBP10.36□□□□□ -0.75
PHGDH-201ENST00000369407 ZNF391Q9UJN7 358 aa10.36□□□□□ -0.75
PHGDH-201ENST00000369407 TFF1P04155 84 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 SLC25A6P12236 298 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 MRPL14Q6P1L8 145 aaKnown RBP10.35□□□□□ -0.75
PHGDH-201ENST00000369407 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 ZCCHC14Q8WYQ9 949 aaKnown RBP10.35□□□□□ -0.75
PHGDH-201ENST00000369407 WDYHV1Q96HA8 205 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 NPCDR1Q9BY65 106 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 ZDHHC11Q9H8X9 412 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A10PA6NDY2 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A18PA6NE21 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A16PA6NEW6 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A20PA6NIJ5 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A8PA6NJQ4 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A22PA8MWA6 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A12PA8MX19 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A5PA8MXJ8 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 SPINK4O60575 86 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A15PP0C7V4 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A13PP0C7W8 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A14PP0C7W9 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FAM90A24PP0C7X0 464 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 COX6A1P12074 109 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 RPL30P62888 115 aaKnown RBP10.35□□□□□ -0.75
PHGDH-201ENST00000369407 FBXW9Q5XUX1 488 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 MED12LQ86YW9 2145 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 SMRP1Q8NCR6 262 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 TXN2Q99757 166 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 PXMP4Q9Y6I8 212 aa10.35□□□□□ -0.75
PHGDH-201ENST00000369407 SLC17A3O00476 420 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 COX5AP20674 150 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 UNQ5815/PRO19632Q6UWF5 114 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 NCKAP5O14513 1909 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 ADAMTS20P59510 1910 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 SERF1AO75920 110 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 TYMSP04818 313 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 OR5G3P0C626 314 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-201ENST00000369407 NUFIP2Q7Z417 695 aaKnown RBP10.34□□□□□ -0.75
PHGDH-201ENST00000369407 TECTBQ96PL2 329 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 PRDM14Q9GZV8 571 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 GAL3ST2Q9H3Q3 398 aa10.34□□□□□ -0.75
PHGDH-201ENST00000369407 UBE2ZQ9H832 354 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms