RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 DDB2Q92466 427 aa11.52□□□□□ -0.56
HMGCS2-201ENST00000369406 RAB1CQ92928 201 aa11.52□□□□□ -0.56
HMGCS2-201ENST00000369406 NEIL1Q96FI4 390 aaPredicted RBP11.52□□□□□ -0.56
HMGCS2-201ENST00000369406 CLEC18AA5D8T8 446 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 PITX3O75364 302 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 DEDDO75618 318 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 S100A11P31949 105 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 CLEC9AQ6UXN8 241 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF383Q8NA42 475 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 CLEC18CQ8NCF0 446 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 OR8B3Q8NGG8 313 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 OR8B2Q96RD0 313 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 GON7Q9BXV9 100 aa11.52□□□□□ -0.57
HMGCS2-201ENST00000369406 TMEM50AO95807 157 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 CTRB1P17538 263 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 KCNRGQ8N5I3 272 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 TSPAN9O75954 239 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 KRASP01116 189 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 GPR6P46095 362 aaPredicted RBP11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 TMEM33P57088 247 aa11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
HMGCS2-201ENST00000369406 TRBV23-1A0A0A0MS06 115 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 FCGR3BO75015 233 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 HKR1P10072 659 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 LY6G5BQ8NDX9 201 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 CCL19Q99731 98 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 SHOXO15266 292 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 B3GALNT1O75752 331 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 RAB7AP51149 207 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 AKR1C2P52895 323 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 TEX261Q6UWH6 196 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 Q8N7P7 452 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 OR10A7Q8NGE5 316 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 LPAR3Q9UBY5 353 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 U3KQ87 197 aa11.5□□□□□ -0.57
HMGCS2-201ENST00000369406 PPIAL4CA0A0B4J2A2 164 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 RAB29O14966 203 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 CT45A6P0DMU7 189 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 CT45A5P0DMU8 189 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 CT45A7P0DMV0 189 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 PPIAL4GP0DN37 164 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 REG1BP48304 166 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 CATR1Q13166 79 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF345Q14585 488 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 RAB9BQ9NP90 201 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 PLXNB1O43157 2135 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 J3QR06 171 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 KRTAP10-9P60411 292 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 MIDNQ504T8 468 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF680Q8NEM1 530 aa11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
HMGCS2-201ENST00000369406 A0A087X0M5 115 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 A0A1B0GX30 115 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 SSSCA1O60232 199 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 SCO1O75880 301 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 OR2F2O95006 317 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 NKX2-1P43699 371 aaPredicted RBP11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 GNB2P62879 340 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 CTAG1AP78358 180 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 ID3Q02535 119 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 OR2F1Q13607 317 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 EXOSC2Q13868 293 aaKnown RBP11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 AQP10Q96PS8 301 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 SSBP3Q9BWW4 388 aaPredicted RBP11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 CYTL1Q9NRR1 136 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 ST8SIA3O43173 380 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 IGHV2-5P01817 119 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 PAX9P55771 341 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 TMEM30BQ3MIR4 351 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 LDLRAD2Q5SZI1 272 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 NSG2Q9Y328 171 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms