RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 WDR54Q9H977 334 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 CXorf51AA0A1B0GTR3 108 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 UNC119Q13432 240 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 GPR82Q96P67 336 aa15.63■□□□□ 0.09
SNX27-202ENST00000368841 TBL2Q9Y4P3 447 aaKnown RBP15.63■□□□□ 0.09
SNX27-202ENST00000368841 IGKV3D-20A0A0C4DH25 116 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 FOXI3A8MTJ6 420 aaPredicted RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 TRGC2P03986 189 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 ACSF3Q4G176 576 aaPredicted RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 MRAP2Q96G30 205 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 S1PR2O95136 353 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 NPBWR2P48146 333 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 SURF2Q15527 256 aaPredicted RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 TDRD15B5MCY1 1934 aaKnown RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 RPL8P62917 257 aaKnown RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 CCDC88CQ9P219 2028 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 FAM201AQ5SY85 155 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 LSM10Q969L4 123 aaKnown RBP15.62■□□□□ 0.09
SNX27-202ENST00000368841 WNT5BQ9H1J7 359 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 MPV17P39210 176 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 FGF12P61328 243 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 RAX2Q96IS3 184 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 TUBA4BQ9H853 241 aa15.62■□□□□ 0.09
SNX27-202ENST00000368841 PGLYRP1O75594 196 aaPredicted RBP15.61■□□□□ 0.09
SNX27-202ENST00000368841 HOXA6P31267 233 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 CHAC2Q8WUX2 184 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 QTRT1Q9BXR0 403 aaKnown RBP15.61■□□□□ 0.09
SNX27-202ENST00000368841 GLIPR1P48060 266 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 CRYBA2P53672 197 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 SLC25A45Q8N413 288 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 WNT9BO14905 357 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 HIST1H1AQ02539 215 aaPredicted RBP15.61■□□□□ 0.09
SNX27-202ENST00000368841 PROB1E7EW31 1015 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 NPFFO15130 113 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 USP54Q70EL1 1684 aa15.61■□□□□ 0.09
SNX27-202ENST00000368841 A0A1W2PPC1 479 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 ITLN2Q8WWU7 325 aaPredicted RBP15.6■□□□□ 0.09
SNX27-202ENST00000368841 CCL27Q9Y4X3 112 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 RELQ04864 619 aaPredicted RBP15.6■□□□□ 0.09
SNX27-202ENST00000368841 MRPL18Q9H0U6 180 aaKnown RBP15.6■□□□□ 0.09
SNX27-202ENST00000368841 COTL1Q14019 142 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 UBE2V2Q15819 145 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 COL5A1-AS1Q5SY13 56 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 GPR146Q96CH1 333 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 SSBP3Q9BWW4 388 aaPredicted RBP15.6■□□□□ 0.09
SNX27-202ENST00000368841 MPDU1O75352 247 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 ASAH2BP0C7U1 165 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 RAG2P55895 527 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 SELENOHQ8IZQ5 122 aaKnown RBP15.6■□□□□ 0.09
SNX27-202ENST00000368841 TMEM74BQ9NUR3 256 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 NGFRP08138 427 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 PARLQ9H300 379 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 HOXC8P31273 242 aa15.6■□□□□ 0.09
SNX27-202ENST00000368841 EGR1P18146 543 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 RPL39P5Q59GN2 51 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 SCNM1Q9BWG6 230 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 BCL2P10415 239 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 FAM74A3Q4VXF1 159 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 CNTRLQ7Z7A1 2325 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 TDRD6O60522 2096 aaKnown RBP15.59■□□□□ 0.09
SNX27-202ENST00000368841 GRIFINA4D1Z8 144 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 CRYBB3P26998 211 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 ZFC3H1O60293 1989 aaKnown RBP15.59■□□□□ 0.09
SNX27-202ENST00000368841 PRR33A8MZF0 331 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 NPIPB6E9PJ23 425 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 CACNG7P62955 275 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 KLF14Q8TD94 323 aaPredicted RBP15.59■□□□□ 0.09
SNX27-202ENST00000368841 FCARP24071 287 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 CTSSP25774 331 aa15.59■□□□□ 0.09
SNX27-202ENST00000368841 A0A1W2PS18 150 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 MGST3O14880 152 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 SP9P0CG40 484 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 C4orf51C9J302 202 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 PTP4A3O75365 173 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 TNFSF18Q9UNG2 199 aa15.58■□□□□ 0.09
SNX27-202ENST00000368841 GDF9O60383 454 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 SFTPCP11686 197 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 PCOLCEQ15113 449 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 FHL5Q5TD97 284 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 ISG15P05161 165 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 ZBTB34Q8NCN2 500 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 SHANK3Q9BYB0 1731 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 NUP214P35658 2090 aaPredicted RBP15.58■□□□□ 0.08
SNX27-202ENST00000368841 FGFRL1Q8N441 504 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 ZNRF1Q8ND25 227 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 A0A0B4J293 547 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 C5orf67F2Z3F1 127 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 SOD3P08294 240 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 HKR1P10072 659 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 MFAP4P55083 255 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 PKIAP61925 76 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 APCDD1LQ8NCL9 501 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 C18orf15Q96N68 181 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 PIKFYVEQ9Y2I7 2098 aa15.58■□□□□ 0.08
SNX27-202ENST00000368841 ST6GALNAC3Q8NDV1 305 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 CXorf65A6NEN9 183 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 H0Y980 276 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 C1QAP02745 245 aa15.57■□□□□ 0.08
SNX27-202ENST00000368841 STAG3L2P0CL84 134 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms