RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CX3CL1P78423 397 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 PITPNAQ00169 270 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 KIAA0141Q14154 515 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-203ENST00000368439 CXorf66Q5JRM2 361 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-203ENST00000368439 MINDY2Q8NBR6 621 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 GINS4Q9BRT9 223 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 PARP11Q9NR21 331 aa14.8□□□□□ -0.04
CKS1B-203ENST00000368439 TRAV41A0A0B4J266 112 aa14.79□□□□□ -0.04
CKS1B-203ENST00000368439 NUDT19A8MXV4 375 aa14.79□□□□□ -0.04
CKS1B-203ENST00000368439 RPS19P39019 145 aaKnown RBP14.79□□□□□ -0.04
CKS1B-203ENST00000368439 FOXB2Q5VYV0 432 aa14.79□□□□□ -0.04
CKS1B-203ENST00000368439 ZNF660Q6AZW8 331 aaPredicted RBP14.79□□□□□ -0.04
CKS1B-203ENST00000368439 RCC1LQ96I51 464 aaKnown RBP14.79□□□□□ -0.04
CKS1B-203ENST00000368439 KLK15Q9H2R5 256 aa14.79□□□□□ -0.04
CKS1B-203ENST00000368439 SPATA2Q9UM82 520 aa14.79□□□□□ -0.04
CKS1B-203ENST00000368439 SPDEFO95238 335 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 IGLV2-23P01705 113 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 APOA2P02652 100 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 GNG2P59768 71 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 DDB2Q92466 427 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 VCX3AQ9NNX9 186 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 SLC35D1Q9NTN3 355 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 METTL1Q9UBP6 276 aaKnown RBP14.78□□□□□ -0.04
CKS1B-203ENST00000368439 NUBP2Q9Y5Y2 271 aa14.78□□□□□ -0.04
CKS1B-203ENST00000368439 TRAV18A0A075B6X5 111 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 A0A0A6YYH2 397 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 A6NJ64 397 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 SOX15O60248 233 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 RPS16P62249 146 aaKnown RBP14.77□□□□□ -0.05
CKS1B-203ENST00000368439 LSM3P62310 102 aaKnown RBP14.77□□□□□ -0.05
CKS1B-203ENST00000368439 DEFB136Q30KP8 78 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 CNIH2Q6PI25 160 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 FLYWCH2Q96CP2 140 aaKnown RBP14.77□□□□□ -0.05
CKS1B-203ENST00000368439 TSNAXQ99598 290 aaKnown RBP14.77□□□□□ -0.05
CKS1B-203ENST00000368439 TPSG1Q9NRR2 321 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 NECAP2Q9NVZ3 263 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 ANXA10Q9UJ72 324 aa14.77□□□□□ -0.05
CKS1B-203ENST00000368439 LINC00473A8K010 186 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 CCL24O00175 119 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 DUS4LO95620 317 aaKnown RBP14.76□□□□□ -0.05
CKS1B-203ENST00000368439 IGLV2-14P01704 120 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 HLA-DQB1P01920 261 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 CRYGBP07316 175 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 CTXN2P0C2S0 81 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 NFYAP23511 347 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-203ENST00000368439 DUTP33316 252 aaKnown RBP14.76□□□□□ -0.05
CKS1B-203ENST00000368439 SSBP2P81877 361 aaPredicted RBP14.76□□□□□ -0.05
CKS1B-203ENST00000368439 PLGLAQ15195 96 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 TMEM177Q53S58 311 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 ZNF562Q6V9R5 426 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 CROCCP3Q8IVE0 287 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 ZNF491Q8N8L2 437 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 CLCC1Q96S66 551 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 AUNIPQ9H7T9 357 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 OR2W1Q9Y3N9 320 aa14.76□□□□□ -0.05
CKS1B-203ENST00000368439 IGKV1D-13A0A0B4J2D9 117 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 SLC25A17O43808 307 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 TUSC2O75896 110 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 CA2P00918 260 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 SMIM18P0DKX4 95 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 IGKV1-13P0DP09 117 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 PTHLHP12272 177 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 TAGLNQ01995 201 aaKnown RBP14.75□□□□□ -0.05
CKS1B-203ENST00000368439 REC114Q7Z4M0 266 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 GVQW1Q8N7I0 195 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 BVESQ8NE79 360 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 OR13F1Q8NGS4 319 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 C4orf3Q8WVX3 66 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 UBE2E2Q96LR5 201 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 FAM103A1Q9BTL3 118 aaKnown RBP14.75□□□□□ -0.05
CKS1B-203ENST00000368439 FUNDC2Q9BWH2 189 aa14.75□□□□□ -0.05
CKS1B-203ENST00000368439 AURKAIP1Q9NWT8 199 aaPredicted RBP14.75□□□□□ -0.05
CKS1B-203ENST00000368439 RBM7Q9Y580 266 aaKnown RBP14.75□□□□□ -0.05
CKS1B-203ENST00000368439 SRRM4A7MD48 611 aaKnown RBP14.74□□□□□ -0.05
CKS1B-203ENST00000368439 I3L521 148 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 ARPC1BO15143 372 aaKnown RBP14.74□□□□□ -0.05
CKS1B-203ENST00000368439 LGALS7P47929 136 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 RAB9AP51151 201 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 FHL3Q13643 280 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 ECSCRQ19T08 205 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 MRGPRG-AS1Q2M3A8 158 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 HOGA1Q86XE5 327 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 ZNF645Q8N7E2 425 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 GNB4Q9HAV0 340 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 DIABLOQ9NR28 239 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 TNCP24821 2201 aa14.74□□□□□ -0.05
CKS1B-203ENST00000368439 A0A1W2PN81 502 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 J3QRK9 145 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 CHRNA7P36544 502 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 LUMP51884 338 aaPredicted RBP14.73□□□□□ -0.05
CKS1B-203ENST00000368439 KRTAP10-11P60412 298 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 NCS1P62166 190 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 RUNX1Q01196 453 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 EGFEM1PQ0D2K5 195 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 EIF4EBP1Q13541 118 aaPredicted RBP14.73□□□□□ -0.05
CKS1B-203ENST00000368439 AKIRIN2Q53H80 203 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 PPP1R27Q86WC6 154 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 TCTEX1D1Q8N7M0 179 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms