RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 GNB4Q9HAV0 340 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 AMBNQ9NP70 447 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 ST3GAL6Q9Y274 331 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 EXOGQ9Y2C4 368 aaKnown RBP3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 ORC6Q9Y5N6 252 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 WSB1Q9Y6I7 421 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 SMAD5-AS1Q9Y6J3 95 aa3.99□□□□□ -1.77
RNU4-4P-201ENST00000364588 C12orf77C9JDV5 145 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 G3V318 75 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 AIPO00170 330 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 ATP6V0E1O15342 81 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 MT-ND4P03905 459 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 CNTFRP26992 372 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 PSMB8P28062 276 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 GBX2P52951 348 aaPredicted RBP3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 GNB1P62873 340 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 MMDQ15546 238 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 SLC22A6Q4U2R8 563 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 CT45A1Q5HYN5 189 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 SLC25A30Q5SVS4 291 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 DDI2Q5TDH0 399 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 XAF1Q6GPH4 301 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 ASCL4Q6XD76 172 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 SLC25A48Q6ZT89 311 aaKnown RBP3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 C5orf24Q7Z6I8 188 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 SYS1Q8N2H4 156 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 FAM71E2Q8N5Q1 922 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 LINC00311Q8N616 119 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 Q8NFD4 153 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR52M1Q8NGK5 317 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR52I1Q8NGK6 324 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR1N2Q8NGR9 330 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR13C5Q8NGS8 318 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR4K15Q8NH41 348 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR1L1Q8NH94 360 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 CT45A3Q8NHU0 189 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 CASTOR1Q8WTX7 329 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 PYDC1Q8WXC3 89 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 DCUN1D4Q92564 292 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 TMEM106AQ96A25 262 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 CYYR1Q96J86 154 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 S100A13Q99584 98 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 ALX4Q9H161 411 aaPredicted RBP3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 METTL9Q9H1A3 318 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 ISYNA1Q9NPH2 558 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 PARP11Q9NR21 331 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 GNG12Q9UBI6 72 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF107Q9UII5 783 aaPredicted RBP3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 TRAPPC2LQ9UL33 140 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 GMPPBQ9Y5P6 360 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 SORL1Q92673 2214 aa3.98□□□□□ -1.77
RNU4-4P-201ENST00000364588 HUWE1Q7Z6Z7 4374 aaKnown RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 SNTNA6NMZ2 147 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MCRIP1C9JLW8 97 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 I3L521 148 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OVOL1O14753 267 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 TXNL1O43396 289 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ORC5O43913 435 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 SAP30O75446 220 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 CIB2O75838 187 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 FADS2O95864 444 aaKnown RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 HBZP02008 142 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 IGF1P05019 195 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 CD2P06729 351 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR8U8P0C7N1 319 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 FRMD6-AS1P0C7T7 363 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR5H8P0DN80 308 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 GTF2F2P13984 249 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 SPNP16150 400 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 GABRB1P18505 474 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 RCC1P18754 421 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF93P35789 620 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 VHLP40337 213 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ALDH3A2P51648 485 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 CRIP2P52943 208 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ACTBP60709 375 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 PPP3R1P63098 170 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ADARB1P78563 741 aaKnown RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 GABPB1Q06547 395 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF616Q08AN1 781 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MRPL28Q13084 256 aaKnown RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 KIAA0141Q14154 515 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 GNMTQ14749 295 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MPV17LQ2QL34 196 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 NHLRC3Q5JS37 347 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 FAM27D1Q5T7N8 215 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 SYT6Q5T7P8 510 aaPredicted RBP3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR2G6Q5TZ20 316 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZFAND6Q6FIF0 208 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF497Q6ZNH5 498 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 LINC00596Q86U02 117 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 STX19Q8N4C7 294 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 CBR4Q8N4T8 237 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF491Q8N8L2 437 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 C8orf31Q8N9H6 132 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 ZNF439Q8NDP4 499 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR8H1Q8NGG4 311 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 OR52I2Q8NH67 350 aa3.97□□□□□ -1.77
RNU4-4P-201ENST00000364588 MYOZ3Q8TDC0 251 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms