RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SDSLQ96GA7 329 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 GPR87Q9BY21 358 aa8.88□□□□□ -0.99
SMC3-201ENST00000361804 PCNX2A6NKB5 2137 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 PFN1P07737 140 aaKnown RBP8.87□□□□□ -0.99
SMC3-201ENST00000361804 HBG1P69891 147 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 HBG2P69892 147 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 BSXQ3C1V8 233 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 UTF1Q5T230 341 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 MRGPRGQ86SM5 289 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 OR10G9Q8NGN4 311 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 OR10G7Q8NGN6 311 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 HEATR1Q9H583 2144 aaKnown RBP8.87□□□□□ -0.99
SMC3-201ENST00000361804 C12orf77C9JDV5 145 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 GZMBP10144 247 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 MPV17P39210 176 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 TMEM241Q24JQ0 296 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 PRAMEF6Q5VXH4 476 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 FAM173AQ9BQD7 235 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 CDH20Q9HBT6 801 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 ANKRD11Q6UB99 2663 aaPredicted RBP8.87□□□□□ -0.99
SMC3-201ENST00000361804 GVINP1Q7Z2Y8 2422 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 LINC00473A8K010 186 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 CYC1P08574 325 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 ATP5G3P48201 142 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
SMC3-201ENST00000361804 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
SMC3-201ENST00000361804 OTOGLQ3ZCN5 2332 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 J3QT63 122 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 SSPNQ14714 243 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 ZNF664Q8N3J9 261 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 PATZ1Q9HBE1 687 aaKnown RBP8.86□□□□□ -0.99
SMC3-201ENST00000361804 H7BYZ3 331 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 GATCO43716 136 aaKnown RBP8.86□□□□□ -0.99
SMC3-201ENST00000361804 TGFBR3Q03167 851 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 OR13D1Q8NGV5 346 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 SLC25A40Q8TBP6 338 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 IER2Q9BTL4 223 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 LIN7CQ9NUP9 197 aaKnown RBP8.86□□□□□ -0.99
SMC3-201ENST00000361804 HCFC1P51610 2035 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 MPLP40238 635 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 GABRA2P47869 451 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 EDDM3BP56851 147 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 SRSF7Q16629 238 aaKnown RBP eCLIP8.86□□□□□ -0.993e-6■■■■□ 20.4
SMC3-201ENST00000361804 DPPA3Q6W0C5 159 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 TCF23Q7RTU1 214 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 LSM10Q969L4 123 aaKnown RBP8.86□□□□□ -0.99
SMC3-201ENST00000361804 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 MSL2Q9HCI7 577 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 OR4A8P0C604 315 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 C1QTNF9P0C862 333 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 MEOX1P50221 254 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 TMEM14EPQ6UXP3 125 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 ATG101Q9BSB4 218 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 OPA3Q9H6K4 179 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
SMC3-201ENST00000361804 B4DEV8 164 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 NUPR1O60356 82 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 KBTBD11O94819 623 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 GYPAP02724 150 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 OPN1MWP04001 364 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 OPN1MW2P0DN77 364 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 OPN1MW3P0DN78 364 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 EDDM3AQ14507 147 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 Q3ZCU0 254 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 OR1P1Q8NH06 330 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 PSMG3Q9BT73 122 aaPredicted RBP8.85□□□□□ -0.99
SMC3-201ENST00000361804 RIMS4Q9H426 269 aaPredicted RBP8.85□□□□□ -0.99
SMC3-201ENST00000361804 OR5B21A6NL26 309 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 HAND1O96004 215 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 HBZP02008 142 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 ARR3P36575 388 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
SMC3-201ENST00000361804 PSG7Q13046 419 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 PMS2P11Q13670 270 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 OBP2BQ9NPH6 170 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 MPC1Q9Y5U8 109 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 TNCP24821 2201 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 ELOA3CA0A087WX78 387 aaPredicted RBP8.85□□□□□ -0.99
SMC3-201ENST00000361804 LRP5LA4QPB2 252 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 PPP1CBP62140 327 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 FAM78BQ5VT40 261 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
SMC3-201ENST00000361804 DTD1Q8TEA8 209 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 SPRR3Q9UBC9 169 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 PSG11Q9UQ72 335 aa8.85□□□□□ -0.99
SMC3-201ENST00000361804 TRBV6-6A0A0A6YYG2 114 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 PMS2P5A8MQ11 134 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 SMPD2O60906 423 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 PSMB3P49720 205 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 SERF2P84101 59 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 SRSF6Q13247 344 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms