RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TMEM177Q53S58 311 aa4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 DEFB107AQ8IZN7 70 aa4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 RCN3Q96D15 328 aa4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 TSNAXQ99598 290 aaKnown RBP4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 SRSF8Q9BRL6 282 aaKnown RBP4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 PIPOXQ9P0Z9 390 aa4.36□□□□□ -1.71
CDC42SE2-201ENST00000360515 TRAV10A0A0B4J240 114 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 SYT7O43581 403 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZNF780AO75290 641 aaPredicted RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 NDUFS6O75380 124 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 SCTP09683 121 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 CT45A6P0DMU7 189 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 CT45A5P0DMU8 189 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 CT45A7P0DMV0 189 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 HNF4GQ14541 408 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR4A47Q6IF82 309 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MFSD4AQ8N468 514 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 NEU1Q99519 415 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MED20Q9H944 212 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 PARP11Q9NR21 331 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZNF736B4DX44 427 aaPredicted RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 GSTA4O15217 222 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 HSMCR30P0CW71 290 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 IGFBP3P17936 291 aaPredicted RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 LGALS7P47929 136 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MTCP1P56278 107 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 TPPP2P59282 170 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MMDQ15546 238 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR2T5Q6IEZ7 315 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 LINC00299Q6ZSB3 139 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 SLC16A13Q7RTY0 426 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR2T29Q8NH02 315 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 RAB2BQ8WUD1 216 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 ST8SIA2Q92186 375 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 C9orf16Q9BUW7 83 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 WASHC3Q9Y3C0 194 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 RPL36Q9Y3U8 105 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 NACAE9PAV3 2078 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 LOC107986453A0A1B0GWG9 222 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 FAM230AA0A1W2PPH8 454 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 TEX45Q8NA69 505 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR51A2Q8NGJ7 313 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR13F1Q8NGS4 319 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 CLUHP3Q96NS8 147 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 NIPSNAP1Q9BPW8 284 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 ABHD14AQ9BUJ0 271 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MRPL20Q9BYC9 149 aaKnown RBP4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 FAM118AQ9NWS6 357 aa4.35□□□□□ -1.71
CDC42SE2-201ENST00000360515 MEIKINA0A087WXM9 373 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR4C45A6NMZ5 311 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 TRGV3P03979 118 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 PSME3P61289 254 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 RBMS2Q15434 407 aaKnown RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 NEDD8Q15843 81 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 PAN3Q58A45 887 aaKnown RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZNF57Q68EA5 555 aaPredicted RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 C12orf57Q99622 126 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 MBD2Q9UBB5 411 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 MLXQ9UH92 298 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 EXOGQ9Y2C4 368 aaKnown RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 GSTK1Q9Y2Q3 226 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZAR1LA6NP61 321 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 GABRPO00591 440 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 ANXA8P13928 327 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 CBLN1P23435 193 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 CD40LGP29965 261 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 FCGR2BP31994 310 aaPredicted RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 NUDT2P50583 147 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 DMKNQ6E0U4 476 aaPredicted RBP4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 LYSMD2Q8IV50 215 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 SYS1Q8N2H4 156 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 NECAP1Q8NC96 275 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 BBS1Q8NFJ9 593 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 OR52J3Q8NH60 311 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 ST6GAL2Q96JF0 529 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 IFT46Q9NQC8 304 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 ZNF257Q9Y2Q1 563 aa4.34□□□□□ -1.71
CDC42SE2-201ENST00000360515 RAB19A4D1S5 217 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 F8W036 122 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 GGCTO75223 188 aaKnown RBP4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 CSTBP04080 98 aaKnown RBP4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 CD1AP06126 327 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 MIFP14174 115 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 FOLR2P14207 255 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 FLOT2Q14254 428 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 GPR176Q14439 515 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 GINS1Q14691 196 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 ATXN7L3Q14CW9 347 aaPredicted RBP4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 KISS1Q15726 138 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR2G2Q8NGZ5 317 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 C11orf45Q8TAV5 145 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF556Q9HAH1 456 aa4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 MRPS18AQ9NVS2 196 aaKnown RBP4.34□□□□□ -1.72
CDC42SE2-201ENST00000360515 FAT1Q14517 4588 aa4.33□□□□□ -1.72
CDC42SE2-201ENST00000360515 SPINT2O43291 252 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms